DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6959 and Tpbg

DIOPT Version :10

Sequence 1:NP_650122.1 Gene:CG6959 / 41434 FlyBaseID:FBgn0037956 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_113995.2 Gene:Tpbg / 83684 RGDID:621453 Length:426 Species:Rattus norvegicus


Alignment Length:400 Identity:109/400 - (27%)
Similarity:157/400 - (39%) Gaps:109/400 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 PAACSCGQEMYESEMQYVVNCTNAGLVNTSVLEFMPEQVEVLIFTGNRITELPWNVFGSINNYKQ 96
            ||||.|      ||....|.|.|..|:  .|...:|..|..|..|||::|.||...|........
  Rat    63 PAACEC------SEAARTVKCVNRNLL--EVPADLPPYVRNLFLTGNQMTVLPAGAFARQPPLAD 119

  Fly    97 LRIVDMSSNHIREIRGKSYHHVPRVERLILNHN-------------NLSISR----YEDEVNHHH 144
            |.::::|.||::|:...::.|:|.:.||.|:||             |:|:|.    .|..:||..
  Rat   120 LAVLNLSGNHLKEVGAGAFEHLPGLRRLDLSHNPLTNLSAFTFAGSNVSVSTPSPLLELILNHIV 184

  Fly   145 P----RVFSNFINLQSLHLTDAFEDNSSPQLSEDLHDIFVNSQLVKLQKLHLEQNEITHFKDRNV 205
            |    |...:|..:.      |||...:..|...|       .|..|..|.|..|...:. .|::
  Rat   185 PPEDQRQNGSFEGMV------AFEGMVAAALRSGL-------ALRGLHHLELASNHFLYL-PRDL 235

  Fly   206 FCDLPSLRDLHLGDNDLRDLNF-EVRCLNNLRFLDLERNKFSFVKPTDLRVLNELEERPNRT--- 266
            ...||||:.|.|.:|.|..|.: ..|.|.:|..|.||.|.        |:||:      |.|   
  Rat   236 LDQLPSLKHLDLRNNSLVSLTYASFRNLTHLESLHLEDNA--------LKVLH------NSTLAE 286

  Fly   267 ----ANLIVDFNLNPFGCDCRTAPFRAWITTTRVTVRNKDSLMC-----FHSTGHVDAEPAHLLQ 322
                |::.|..:.||:.|||..|...:|:..|.| |.:|..|.|     ..:.|.:|...:.|  
  Rat   287 WQGLAHVRVFLDNNPWVCDCYMADMVSWLKETEV-VPDKARLTCAFPEKMRNRGLLDLTSSDL-- 348

  Fly   323 MDMGQCADAIAAAATILNTAEDEPHYGDPEASHLQPQAHISGHTATLIFLLIVLTMILLGLLVAL 387
                   |..|.....|.|                          :.:||.|||.  |:|.:..|
  Rat   349 -------DCDATLPQSLQT--------------------------SYVFLGIVLA--LIGAIFLL 378

  Fly   388 V-YVSRDKLK 396
            | |::|..:|
  Rat   379 VLYLNRKGIK 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6959NP_650122.1 LRR <69..>278 CDD:443914 65/237 (27%)
leucine-rich repeat 70..96 CDD:275380 9/25 (36%)
leucine-rich repeat 97..120 CDD:275380 6/22 (27%)
leucine-rich repeat 121..153 CDD:275380 14/52 (27%)
leucine-rich repeat 154..186 CDD:275380 6/31 (19%)
leucine-rich repeat 187..211 CDD:275380 6/23 (26%)
leucine-rich repeat 212..234 CDD:275380 8/22 (36%)
leucine-rich repeat 235..258 CDD:275380 8/22 (36%)
LRRCT 276..328 CDD:214507 16/56 (29%)
TpbgNP_113995.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 34..54
LRRNT 62..90 CDD:396168 12/34 (35%)
leucine-rich repeat 73..95 CDD:275380 7/23 (30%)
LRR <79..>290 CDD:443914 66/240 (28%)
LRR 1 92..113 9/20 (45%)
leucine-rich repeat 96..119 CDD:275380 8/22 (36%)
LRR 2 116..139 5/22 (23%)
leucine-rich repeat 120..143 CDD:275380 6/22 (27%)
LRR 3 141..163 6/21 (29%)
leucine-rich repeat 144..174 CDD:275380 8/29 (28%)
LRR 4 172..210 9/43 (21%)
leucine-rich repeat 175..217 CDD:275380 12/54 (22%)
LRR 5 215..238 6/23 (26%)
leucine-rich repeat 218..241 CDD:275380 6/23 (26%)
LRR 6 239..261 9/21 (43%)
leucine-rich repeat 242..265 CDD:275380 8/22 (36%)
LRR 7 262..281 9/32 (28%)
leucine-rich repeat 266..289 CDD:275380 10/36 (28%)
LRRCT 300..351 CDD:214507 17/60 (28%)
Blue background indicates that the domain is not in the aligned region.

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