DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6959 and tpbgb

DIOPT Version :9

Sequence 1:NP_001138037.1 Gene:CG6959 / 41434 FlyBaseID:FBgn0037956 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_001239391.1 Gene:tpbgb / 792712 ZFINID:ZDB-GENE-091218-2 Length:382 Species:Danio rerio


Alignment Length:406 Identity:95/406 - (23%)
Similarity:144/406 - (35%) Gaps:125/406 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SSSCG--PNFPAACSCGQEMYESEMQYVVNCTNAGLVNTSVLEFMPEQVEVLIFTGNRITELPWN 86
            :|||.  ...||.|.|     ||.   ||||.:..|  |||.:.:||.:..|...||||..|...
Zfish    31 TSSCSSLSTCPAQCLC-----EST---VVNCESQNL--TSVPQPLPENITTLNLNGNRILNLSNA 85

  Fly    87 VFG----------------------SINNYKQLRIVDMSSNHIREIRGKSYHHVPRVERL----- 124
            .|.                      :..|:..||::|:|.|.|.....::.|...::|.|     
Zfish    86 SFPRPLVHLTHLYVSGNQLQELDSMAFQNFSSLRLLDLSDNRILHFSIEALHQDNKIEVLNFSKS 150

  Fly   125 ILNHNNLSISRYEDEVNHHHPRVFSNFINLQSLHLTDAFEDNSSPQLSEDLHDIFVNSQLVKLQK 189
            :.||:.:.:..   .:.||                                       .|.|:.:
Zfish   151 LRNHSYIGVLA---RLFHH---------------------------------------SLPKVSR 173

  Fly   190 LHLEQNEITHFKDRNVFCDLPSLRDLHLGDNDL---RDLNFEVRCLNNLRFLDLERNKFSFVKPT 251
            |.|..|::. |....:|..|..|..|.|.:|.|   |::..:.:.|..   |||..|.|   |..
Zfish   174 LDLSNNDLV-FLPEGIFTGLSELSLLDLRNNSLVSFRNVTSQNKALKE---LDLRDNAF---KAL 231

  Fly   252 DLRVLNELEERPNRTANLIVDFNLNPFGCDCRTAPFRAWITTTRVTVRNKDSLMCFHSTGHVDAE 316
            ....|:||...|    ||.|....||:.|||.......|: ..:..|.::.:|.|.........:
Zfish   232 PNETLSELYSIP----NLRVRLAGNPWRCDCDIEYLLFWL-EKQDFVTDRLNLTCASPRELKHVQ 291

  Fly   317 PAHLLQMDMGQCADAIAAAATILNTAEDEPHYGDPEASHLQPQAHISGHTATLIFLLIVLTMILL 381
            ..||....:...:|.:.....:|     ||.|                     :||.:||.  |:
Zfish   292 LVHLEHSQLPCWSDNVDELNRVL-----EPSY---------------------VFLGLVLA--LI 328

  Fly   382 GLLVALV-YVSRDKLK 396
            |::..|| |::|..:|
Zfish   329 GVIFLLVLYLNRKGIK 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6959NP_001138037.1 leucine-rich repeat 70..96 CDD:275380 8/47 (17%)
LRR_8 95..161 CDD:290566 13/70 (19%)
leucine-rich repeat 97..120 CDD:275380 7/22 (32%)
LRR_RI <116..>224 CDD:238064 20/115 (17%)
leucine-rich repeat 121..153 CDD:275380 6/36 (17%)
leucine-rich repeat 154..186 CDD:275380 1/31 (3%)
LRR_8 186..245 CDD:290566 18/61 (30%)
leucine-rich repeat 187..211 CDD:275380 6/23 (26%)
leucine-rich repeat 212..234 CDD:275380 7/24 (29%)
leucine-rich repeat 235..258 CDD:275380 7/22 (32%)
TPKR_C2 276..328 CDD:301599 11/51 (22%)
tpbgbNP_001239391.1 LRRNT 41..70 CDD:214470 16/38 (42%)
leucine-rich repeat 49..68 CDD:275380 9/23 (39%)
LRR_8 68..128 CDD:290566 13/59 (22%)
leucine-rich repeat 69..93 CDD:275380 7/23 (30%)
LRR_RI <76..230 CDD:238064 40/202 (20%)
leucine-rich repeat 94..117 CDD:275380 1/22 (5%)
leucine-rich repeat 118..141 CDD:275380 7/22 (32%)
leucine-rich repeat 142..170 CDD:275380 7/69 (10%)
LRR_8 169..226 CDD:290566 17/60 (28%)
leucine-rich repeat 171..194 CDD:275380 6/23 (26%)
leucine-rich repeat 195..217 CDD:275380 6/21 (29%)
leucine-rich repeat 218..241 CDD:275380 10/28 (36%)
LRRCT 252..302 CDD:214507 11/50 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 83 1.000 Inparanoid score I5166
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D341562at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR24364
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
55.030

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