DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6959 and si:dkey-1j5.4

DIOPT Version :9

Sequence 1:NP_001138037.1 Gene:CG6959 / 41434 FlyBaseID:FBgn0037956 Length:425 Species:Drosophila melanogaster
Sequence 2:XP_009293145.1 Gene:si:dkey-1j5.4 / 563949 ZFINID:ZDB-GENE-130603-91 Length:357 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6959NP_001138037.1 leucine-rich repeat 70..96 CDD:275380
LRR_8 95..161 CDD:290566
leucine-rich repeat 97..120 CDD:275380
LRR_RI <116..>224 CDD:238064
leucine-rich repeat 121..153 CDD:275380
leucine-rich repeat 154..186 CDD:275380
LRR_8 186..245 CDD:290566
leucine-rich repeat 187..211 CDD:275380
leucine-rich repeat 212..234 CDD:275380
leucine-rich repeat 235..258 CDD:275380
TPKR_C2 276..328 CDD:301599
si:dkey-1j5.4XP_009293145.1 LRRNT 21..53 CDD:279764
leucine-rich repeat 36..54 CDD:275380
LRR_8 58..114 CDD:290566
LRR_RI 59..282 CDD:238064
leucine-rich repeat 80..103 CDD:275380
LRR_8 103..162 CDD:290566
leucine-rich repeat 104..127 CDD:275380
leucine-rich repeat 128..151 CDD:275380
LRR_8 150..210 CDD:290566
leucine-rich repeat 152..175 CDD:275380
leucine-rich repeat 176..199 CDD:275380
leucine-rich repeat 200..223 CDD:275380
LRR_8 222..282 CDD:290566
leucine-rich repeat 224..247 CDD:275380
leucine-rich repeat 248..271 CDD:275380
leucine-rich repeat 272..293 CDD:275380
LRRCT 304..356 CDD:214507
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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