DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6959 and zgc:153913

DIOPT Version :10

Sequence 1:NP_650122.1 Gene:CG6959 / 41434 FlyBaseID:FBgn0037956 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_001073448.1 Gene:zgc:153913 / 559700 ZFINID:ZDB-GENE-061103-397 Length:496 Species:Danio rerio


Alignment Length:339 Identity:68/339 - (20%)
Similarity:130/339 - (38%) Gaps:104/339 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 LIFTGNRITELPWNVFGSINNYKQLRIVDMSSNHIREIRGKSYHHVPRVERLILNHNNLS----- 132
            |:...|:::.:...:|.|::   ||.::.:..|.:..:.|:.:..:.|::.|.|:.|.:|     
Zfish   127 LLLNNNKLSGVDAGLFHSLH---QLEMLQLRGNGLSFLSGRLFQRLHRLQELDLSFNQISSLSTE 188

  Fly   133 ----------ISRYEDEVNHHHPRVFSNFINLQSLH----------------------------- 158
                      :|...:::.:....:|::..:||.|:                             
Zfish   189 LFQNNSELRVLSLQANKIPNLPDGIFTHLDHLQELNLRSNLIRVLTPGSFPASLKTLILKKNLLE 253

  Fly   159 -LTDA---------FEDNSSPQLSEDLHDIFVNSQLVKLQKLHLEQNEITHFKDRNVFCDLPSLR 213
             ||:|         :.|.|...|:|...|:|.|  |:.|:.|.|.:|.|:.... :||..|.|::
Zfish   254 KLTNAVFHTLHYITYLDLSQNSLTEVPADLFQN--LISLETLDLSENRISTLAG-SVFKGLFSIK 315

  Fly   214 DLHLGDNDLRDLNFEVRCL---NNLRFLDLERNKF-----SFVKPTDLRVLNELEERPNRTANLI 270
            .::|..|.|  ::.:...|   ::|:.|||..|..     .|.:..|.:.:.||..         
Zfish   316 SVYLQKNSL--ISVDAHLLKDQHDLQLLDLSNNSLRSIPSGFFEDLDFQCVFELRG--------- 369

  Fly   271 VDFNLNPFGCDCRTAPFRAWITTTRVTVRNKDSLMC-------FHSTGHVDAE-----------P 317
                 ||:.|||....|..|:......|::...:.|       .|:...||.|           .
Zfish   370 -----NPWSCDCGIHYFYDWLKYNHKHVKDLSRVSCEAPELIQGHNLRSVDREQLVCSRNSSSNS 429

  Fly   318 AHLLQMDMG--QCA 329
            ..::.:|.|  ||:
Zfish   430 PEMISVDEGSIQCS 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6959NP_650122.1 LRR <69..>278 CDD:443914 52/266 (20%)
leucine-rich repeat 70..96 CDD:275380 4/22 (18%)
leucine-rich repeat 97..120 CDD:275380 3/22 (14%)
leucine-rich repeat 121..153 CDD:275380 6/46 (13%)
leucine-rich repeat 154..186 CDD:275380 14/70 (20%)
leucine-rich repeat 187..211 CDD:275380 8/23 (35%)
leucine-rich repeat 212..234 CDD:275380 4/24 (17%)
leucine-rich repeat 235..258 CDD:275380 7/27 (26%)
LRRCT 276..328 CDD:214507 15/71 (21%)
zgc:153913NP_001073448.1 leucine-rich repeat 75..98 CDD:275380
LRR <142..>352 CDD:443914 45/217 (21%)
leucine-rich repeat 148..171 CDD:275380 3/22 (14%)
leucine-rich repeat 172..195 CDD:275380 4/22 (18%)
leucine-rich repeat 196..219 CDD:275380 2/22 (9%)
leucine-rich repeat 220..241 CDD:275380 3/20 (15%)
leucine-rich repeat 242..265 CDD:275380 3/22 (14%)
leucine-rich repeat 266..289 CDD:275380 8/24 (33%)
leucine-rich repeat 290..313 CDD:275380 8/23 (35%)
leucine-rich repeat 314..337 CDD:275380 4/24 (17%)
leucine-rich repeat 338..359 CDD:275380 6/20 (30%)
PCC 342..>427 CDD:188093 20/98 (20%)
Blue background indicates that the domain is not in the aligned region.

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