| Sequence 1: | NP_650122.1 | Gene: | CG6959 / 41434 | FlyBaseID: | FBgn0037956 | Length: | 425 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_852045.1 | Gene: | Rtn4rl2 / 311169 | RGDID: | 727797 | Length: | 420 | Species: | Rattus norvegicus |
| Alignment Length: | 313 | Identity: | 88/313 - (28%) |
|---|---|---|---|
| Similarity: | 120/313 - (38%) | Gaps: | 66/313 - (21%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 29 PNFPAACSCGQEMYESEMQYVVNCTNAGLVNTSVLEFMPEQVEVLIFTGNRITELPWNVFGSINN 93
Fly 94 YKQLRIVDMSSNHIREIRGKSYHHVPRVERLILNHNNLSISRYEDEVNHHHPRVFSNFINLQSLH 158
Fly 159 LTDAFEDNSSPQLSEDLHDIFVNSQLVKLQKLHLEQNEITHFKDRNVFCDLPSLRDLHLGDNDLR 223
Fly 224 DLNFEV-RCLNNLRFLDLERNKF------SFVKPTDLRVL----NELEERPNRT-ANL----IVD 272
Fly 273 FNLNPFGCDCRTAPFRAWITTTRV-------------------TVRNKDSLMC 306 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG6959 | NP_650122.1 | LRR | <69..>278 | CDD:443914 | 64/224 (29%) |
| leucine-rich repeat | 70..96 | CDD:275380 | 6/25 (24%) | ||
| leucine-rich repeat | 97..120 | CDD:275380 | 5/22 (23%) | ||
| leucine-rich repeat | 121..153 | CDD:275380 | 6/31 (19%) | ||
| leucine-rich repeat | 154..186 | CDD:275380 | 12/31 (39%) | ||
| leucine-rich repeat | 187..211 | CDD:275380 | 10/23 (43%) | ||
| leucine-rich repeat | 212..234 | CDD:275380 | 10/22 (45%) | ||
| leucine-rich repeat | 235..258 | CDD:275380 | 7/32 (22%) | ||
| LRRCT | 276..328 | CDD:214507 | 15/50 (30%) | ||
| Rtn4rl2 | NP_852045.1 | LRR | <55..>261 | CDD:443914 | 65/232 (28%) |
| LRR 1 | 61..82 | 6/25 (24%) | |||
| leucine-rich repeat | 62..83 | CDD:275380 | 6/25 (24%) | ||
| LRR 2 | 83..104 | 4/20 (20%) | |||
| leucine-rich repeat | 84..107 | CDD:275380 | 5/22 (23%) | ||
| LRR 3 | 107..129 | 6/29 (21%) | |||
| leucine-rich repeat | 108..132 | CDD:275380 | 6/31 (19%) | ||
| LRR 4 | 132..153 | 11/29 (38%) | |||
| leucine-rich repeat | 133..156 | CDD:275380 | 12/31 (39%) | ||
| LRR 5 | 156..177 | 8/21 (38%) | |||
| leucine-rich repeat | 157..180 | CDD:275380 | 10/23 (43%) | ||
| LRR 6 | 180..201 | 8/20 (40%) | |||
| leucine-rich repeat | 181..204 | CDD:275380 | 10/22 (45%) | ||
| LRR 7 | 204..225 | 5/20 (25%) | |||
| leucine-rich repeat | 205..228 | CDD:275380 | 5/22 (23%) | ||
| LRR 8 | 228..249 | 5/20 (25%) | |||
| leucine-rich repeat | 229..252 | CDD:275380 | 7/22 (32%) | ||
| LRRCT | 261..311 | CDD:214507 | 15/50 (30%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 286..390 | 4/25 (16%) | |||
| PHA03247 | 289..>369 | CDD:223021 | 4/22 (18%) | ||
| Important for interaction with MAG. /evidence=ECO:0000269|PubMed:19420245 | 315..327 | ||||
| Blue background indicates that the domain is not in the aligned region. | |||||