DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6959 and waif2

DIOPT Version :9

Sequence 1:NP_001138037.1 Gene:CG6959 / 41434 FlyBaseID:FBgn0037956 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_001245160.1 Gene:waif2 / 100884149 ZFINID:ZDB-GENE-120209-3 Length:313 Species:Danio rerio


Alignment Length:392 Identity:83/392 - (21%)
Similarity:140/392 - (35%) Gaps:112/392 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 EMQYVVNCTNAGLVNTSV-----------LEFMPEQVEVLIFTGNRITELPWNVFGSIN--NYKQ 96
            |.|...|||   ..|.||           || :|.:.::|......::.|....| |.|  |...
Zfish     9 EAQCPFNCT---CFNRSVMCEDSDEIKLPLE-VPRRTQILTLNNVNMSVLIERAF-SANGTNAHS 68

  Fly    97 LRIVDMSSNHIREIRGKSYHHVPRVERLILNHNNLSISRYEDEVNHHHPRVFSNFINLQSLHLTD 161
            |..:.:..|:|:.|:..::..:.|:..|.|:.|     |.||.    ||..||....|::|:|:.
Zfish    69 LHELSLRDNNIQVIQSCAFCGLHRLHLLDLSRN-----RLEDV----HPEAFSELNQLRNLNLSY 124

  Fly   162 AFEDNSSPQLSEDLHDIFVNSQLVKLQKLHLEQNEITHFKDRNVFCDLPSLRDLHLGDNDLRDLN 226
            ......:.|||..|.                               .|.:|:.|.|..|.|:.:.
Zfish   125 TLTAAGANQLSSALD-------------------------------SLSNLQILDLSGNRLKTIP 158

  Fly   227 FEVRCLNNLRFLDLERNKFSFVKPTDLRVLNELEERPNRTANLIVDFNLNPFGCDC-RTAPFRAW 290
            .......:|..|:|..|..:.:...:|..|:|..|       :.|..:.|||.|.| |...|..|
Zfish   159 LSGFGKFSLTMLNLTHNSITTLDTNELTKLSEYRE-------MRVYLSHNPFDCRCDRLREFHDW 216

  Fly   291 ITTTRVTVRNKDSLMCFHSTGHVDAEPAHLLQMDMGQCADAIAAAATILNTAEDEPHYGDPEASH 355
            :         |:|                      .||||:......:....:|           
Zfish   217 L---------KNS----------------------SQCADSKNLRCALPKVQKD----------- 239

  Fly   356 LQPQAHISGHTATLIFLLIVLTMILLGLLVALVYVSRDKLKYMITPVFDNVAKKVQ---YTSIKD 417
            |:.::....:..:.:.|.|||.:|.:..|:.| |::|..:|..:..:.:....:::   |...:|
Zfish   240 LRVESVDCKNVGSFVLLGIVLALIGVVFLMVL-YLNRRGIKRWLNNIREACRDQMEVYHYRYEQD 303

  Fly   418 ED 419
            .|
Zfish   304 SD 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6959NP_001138037.1 leucine-rich repeat 70..96 CDD:275380 6/27 (22%)
LRR_8 95..161 CDD:290566 18/65 (28%)
leucine-rich repeat 97..120 CDD:275380 4/22 (18%)
LRR_RI <116..>224 CDD:238064 24/107 (22%)
leucine-rich repeat 121..153 CDD:275380 10/31 (32%)
leucine-rich repeat 154..186 CDD:275380 7/31 (23%)
LRR_8 186..245 CDD:290566 10/58 (17%)
leucine-rich repeat 187..211 CDD:275380 1/23 (4%)
leucine-rich repeat 212..234 CDD:275380 5/21 (24%)
leucine-rich repeat 235..258 CDD:275380 6/22 (27%)
TPKR_C2 276..328 CDD:301599 10/52 (19%)
waif2NP_001245160.1 LRRNT 11..42 CDD:214470 10/34 (29%)
leucine-rich repeat 42..68 CDD:275380 6/26 (23%)
LRR_RI <68..156 CDD:238064 28/127 (22%)
LRR_8 68..126 CDD:290566 18/66 (27%)
leucine-rich repeat 69..92 CDD:275380 4/22 (18%)
leucine-rich repeat 93..116 CDD:275380 10/31 (32%)
leucine-rich repeat 117..143 CDD:275380 8/56 (14%)
LRR_8 142..203 CDD:290566 15/67 (22%)
LRR_4 143..182 CDD:289563 9/38 (24%)
leucine-rich repeat 144..166 CDD:275380 5/21 (24%)
leucine-rich repeat 167..190 CDD:275380 6/22 (27%)
TPKR_C2 201..246 CDD:301599 16/86 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 83 1.000 Inparanoid score I5166
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D341562at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
43.930

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