DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6959 and tpbg

DIOPT Version :10

Sequence 1:NP_650122.1 Gene:CG6959 / 41434 FlyBaseID:FBgn0037956 Length:425 Species:Drosophila melanogaster
Sequence 2:XP_002938502.1 Gene:tpbg / 100379816 XenbaseID:XB-GENE-1016283 Length:404 Species:Xenopus tropicalis


Alignment Length:421 Identity:112/421 - (26%)
Similarity:184/421 - (43%) Gaps:97/421 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ILVVAIAAIILAIGAGGVLGE--NSSSCGPNFPAACSCGQEMYESEMQYVVNCTNAGLVNTSVLE 64
            ||.:.:...||    |||..:  ..|.|    |.:|.|      ||....|.|....|  ..|.:
 Frog    33 ILFLFVLLHIL----GGVSSQLVQQSPC----PTSCVC------SEASRTVKCEKKDL--NVVPQ 81

  Fly    65 FMPEQVEVLIFTGNRITELPWNVFGSINNYKQLRIVDMSSNHIREIRGKSYHHVPRVERLILNHN 129
            .:|..|:.|..|||.|:.|. ..|.......:|..:|:|.||::|:....:.::|.:..|.|::|
 Frog    82 NIPPYVQNLTITGNNISTLN-RAFRQEQPLSELSNLDLSDNHLQELGSNVFSYLPSLTYLDLSNN 145

  Fly   130 NLS-ISRYEDEVNHHHPRVFSNFINLQSLHLTDAFEDNSSPQLSEDLHDIFVNSQLV-------- 185
            :|. ||....:|:.      |..|.|:.|.::::|::.            |:.|.|.        
 Frog   146 DLGIISNLSFQVDG------SGSIPLKELKISNSFKNE------------FLISMLAKSFDIGAP 192

  Fly   186 -KLQKLHLEQNEITHFKDRNVFCDLPSLRDLHLGDNDLRDLNFEV-RCLNNLRFLDLERNKFSFV 248
             ||:||.|..|:|. |..:.:|..||:||.::|.:|.|...:.:: :.|::|..|||..|....:
 Frog   193 RKLEKLELSGNDIL-FLPKGMFSPLPNLRHINLSNNSLTSFSADIFKDLSHLETLDLSNNALKRL 256

  Fly   249 K-PTDLRVLNELEERPNRTANLIVDFNLNPFGCDCRTAPFRAWITTTRVTVRNKDSLMCFHSTGH 312
            : .|...::::        .||:::.|.|.:.|||....|..|:..|:: |:...||:|      
 Frog   257 RNATSFDLISQ--------KNLLINLNDNSWECDCMIEEFSRWLKDTKL-VKESSSLVC------ 306

  Fly   313 VDAEPAHLLQMDMGQCADAIAAAATILNTAE---DEPHYGDPEASHLQPQAHISGHTATLIFLLI 374
              |.|.::..           .|...||.:|   .||   |...| ||         .:.:||.|
 Frog   307 --AFPENMKD-----------RAIVELNISELKCPEP---DDNTS-LQ---------TSYVFLGI 345

  Fly   375 VLTMILLGLLVALV-YVSRDKLKYMITPVFD 404
            ||.  |:|::..|| |::|..:|..|..:.|
 Frog   346 VLA--LIGVIFLLVLYLNRKGIKKWIYNIRD 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6959NP_650122.1 LRR <69..>278 CDD:443914 57/220 (26%)
leucine-rich repeat 70..96 CDD:275380 8/25 (32%)
leucine-rich repeat 97..120 CDD:275380 6/22 (27%)
leucine-rich repeat 121..153 CDD:275380 8/32 (25%)
leucine-rich repeat 154..186 CDD:275380 6/40 (15%)
leucine-rich repeat 187..211 CDD:275380 9/23 (39%)
leucine-rich repeat 212..234 CDD:275380 6/22 (27%)
leucine-rich repeat 235..258 CDD:275380 6/23 (26%)
LRRCT 276..328 CDD:214507 13/51 (25%)
tpbgXP_002938502.1 leucine-rich repeat 90..112 CDD:275380 7/22 (32%)
LRR <110..>277 CDD:443914 48/193 (25%)
leucine-rich repeat 113..136 CDD:275380 6/22 (27%)
leucine-rich repeat 137..160 CDD:275380 7/28 (25%)
leucine-rich repeat 165..194 CDD:275380 6/40 (15%)
LRR_8 193..253 CDD:404697 22/60 (37%)
leucine-rich repeat 195..218 CDD:275380 9/23 (39%)
leucine-rich repeat 219..242 CDD:275380 6/22 (27%)
leucine-rich repeat 267..281 CDD:275378 4/21 (19%)
LRRCT 277..328 CDD:214507 17/70 (24%)

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