DRSC/TRiP Functional Genomics Resources

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Protein Alignment COX5A and cox5ab

DIOPT Version :10

Sequence 1:NP_477217.1 Gene:COX5A / 41432 FlyBaseID:FBgn0019624 Length:149 Species:Drosophila melanogaster
Sequence 2:NP_001292506.1 Gene:cox5ab / 326962 ZFINID:ZDB-GENE-030131-5162 Length:138 Species:Danio rerio


Alignment Length:135 Identity:73/135 - (54%)
Similarity:93/135 - (68%) Gaps:7/135 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 ASALRSSLVGTSSRVA-----AVRCL-HGTEESAEEFDKRYEKYFSREGIDGWEIRKGMNDLLGM 68
            |:.||..|..:.:|.|     ||||. |...|:.||||.|:..|||:..:|.||:|||||.|:|.
Zfish     4 AAVLRGFLGLSRTRAAQTAPLAVRCYSHAKVETDEEFDSRWVTYFSKPDLDAWELRKGMNTLIGY 68

  Fly    69 DLVPSPKIIEAGLRASRRVNDIALAIRWLEGCKDKCGDQKATLYPYLLEKITPTLQELGIPTIEE 133
            ||||.|||:::.|||.||:||:|.|||.||..|||.|..| .:|||:::::.||||||||.|.||
Zfish    69 DLVPEPKILDSALRACRRLNDLASAIRILEAVKDKSGPHK-EIYPYVIQELKPTLQELGISTPEE 132

  Fly   134 LGYDK 138
            ||.||
Zfish   133 LGIDK 137

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
COX5ANP_477217.1 Cyt_c_Oxidase_Va 33..136 CDD:238463 59/102 (58%)
cox5abNP_001292506.1 Cyt_c_Oxidase_Va 33..134 CDD:238463 58/101 (57%)

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