Protein Alignment glo and Rbm12

DIOPT Version :9

• Sequence 1: NP_650120.1
• Gene: glo / 41431
• FlyBaseID: FBgn0259139
• Length: 586
• Species: Drosophila melanogaster
• Sequence 2: NP_001032746.1
• Gene: Rbm12 / 652928
• RGDID: 1594333
• Length: 1032
• Species: Rattus norvegicus
• Alignment Length: 633
• Identity: 151/633 - (23%)
• Similarity: 240/633 - (37%)
• Gaps: 167/633 - (26%)

  Fly    51 VRLRGLPWSATHKEILDFLENVNVTNGSAGIHLVTSRVDGKNTGEAYVEVASQEDVEEARKLNKA 115
            |.|:|||:.|.:|.::||.:.:::...|.   .:....:||.|||.:||..:..|.:.|...:|.
  Rat   432 VYLKGLPFEAENKHVIDFFKKLDIVEDSI---YIAYGPNGKATGEGFVEFRNDADYKAALCRHKQ 493

  Fly   116 SMGHRYIEVFTATPK---------------------------EAKEAMRKISGHGTAFVVKLRGL 153
            .||:|:|:|...|.|                           |.:.:..|:..|       :..:
  Rat   494 YMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYDQREMVLNPEGEVSSAKVCAH-------ITNI 551

  Fly   154 PYAVTEQQIEEFFSGLDIKTDREGILFVMDRRGRATGEAFVQFESQDDTEQALGRNREKIGHRYI 218
            |:::|:..:.:|..|:.:  |...:..::|..|:..|:|.|||:::||..::...:|:|:..|..
  Rat   552 PFSITKMDVLQFLEGIPV--DENAVHVLVDNNGQGLGQALVQFKTEDDAHKSEHLHRKKLNGREA 614

  Fly   219 EIFRSSIAEMKR------ATGAGG---GVGGRPGPYDIRDRGANRGGNDFGGGRNDWGNNGNFGV 274
            .:...::.:|:.      |.|..|   .|.|.|....|...|....|....|       ..:.|:
  Rat   615 FVHIVTLEDMREIEKNPPAQGKKGLKIPVPGNPAVPVIPSAGMPAAGIPSAG-------IPSAGI 672

  Fly   275 GANNM---------LGFNNLPS--LMNSGNFGNNQGGNNGNFGNNSGPSNFGNFGGGNNG-GNSG 327
            .:..|         |....||:  |..||..|:...|:........||   |..|.|..| |..|
  Rat   673 PSAGMPSAGMPSAGLPAAGLPAAGLPGSGMPGSGMPGSGIPGPGIPGP---GIPGPGIPGPGMPG 734

  Fly   328 NFGNDSGNSGNFGNFGNNGGG-------------------------------------------- 348
            ......|..|.    |..|.|
  Rat   735 PGIPGPGIPGP----GIPGAGIPGPPMPGPAMPGPSMPGPAMPGPAMPGPAMPGPAIPGPALPGP 795

  Fly   349 --------NFGGNNN-----GGGGFNSGNNFNSPGGVNNFGNNGGSNFG------GNGG--GGFN 392
                    :.||..:     |....|:|..||.||   |||  |.:.||      |.||  |...
  Rat   796 AIPGPGIPSAGGEEHVFLTVGSKEANNGPPFNFPG---NFG--GPNAFGPPLPPPGLGGAFGDVR 855

  Fly   393 NGGNFVSSSGVGNFG----PIGGGRNNNNGNFGNSG----FGNFGGNNNVGSNFGGGNNGGGGGF 449
            .....|.:||:...|    ..||..||.:|..|..|    |||..|:.|....||.|..|.|...
  Rat   856 PVMPSVGNSGLPGLGLEVPGFGGAPNNISGPSGFGGIPQNFGNGPGSLNAPPGFGNGPPGLGSVP 920

  Fly   450 NNGSN---FGGGNS-----MGGGGNFGPIGGGRGNDIEYYTIHMRGLPYTSFENDVFKFF--EPI 504
            ::.|.   ||.|..     :||...||...|..|..|    |.::.:|:|...:::..||  ..:
  Rat   921 SHLSGPPAFGPGPGPGPIHIGGPPGFGASSGKPGPTI----IKVQNMPFTVSIDEILDFFYGYQV 981

  Fly   505 RPANVRINYNKKGLHSGTADAYFDTYEDSQVA-MKRHREQMGSRYIEL 551
            .|.:|.:.||:||:.:|.|...|::.:::..| :..:...:|||.::|
  Rat   982 IPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVKL 1029

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
glo	NP_650120.1	RRM_SF	51..125	CDD:302621	24/73 (33%)
		RRM2_hnRNPH_like	146..224	CDD:240948	17/77 (22%)
		RRM3_hnRNPH_CRSF1_like	481..555	CDD:240950	19/74 (26%)
Rbm12	NP_001032746.1	RRM1_RBM12	1..92	CDD:241189
		RRM2_RBM12	303..377	CDD:410141
		RRM3_RBM12	421..521	CDD:409934	27/91 (30%)
		RRM4_RBM12	545..632	CDD:410143	19/95 (20%)
		PHA03377	<642..>701	CDD:177614	13/65 (20%)
		PRK15313	<770..>822	CDD:237940	3/51 (6%)
		RRM5_RBM12	955..1030	CDD:410145	20/79 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166349095
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840