Sequence 1: | NP_650120.1 | Gene: | glo / 41431 | FlyBaseID: | FBgn0259139 | Length: | 586 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001032362.1 | Gene: | Hnrnpf / 64200 | RGDID: | 620366 | Length: | 415 | Species: | Rattus norvegicus |
Alignment Length: | 581 | Identity: | 160/581 - (27%) |
---|---|---|---|
Similarity: | 230/581 - (39%) | Gaps: | 205/581 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 35 EDGGGKIENVGESPKFVRLRGLPWSATHKEILDFLENVNVTNGSAGIHLVTSRVDGKNTGEAYVE 99
Fly 100 VASQEDVEEARKLNKASMGHRYIEVFTATPKEAKEAMRKISGHGTA-----FVVKLRGLPYAVTE 159
Fly 160 QQIEEFFSGLDIKTDREGILFVMDRRGRATGEAFVQFESQDDTEQALGRNREKIGHRYIEIFRSS 224
Fly 225 IAEMKRATGAGGGVGG--RPGPYDIRDRGANRGGNDFGGGRNDWGNNGNFGVGANNMLGFNNLPS 287
Fly 288 LMNSGNFGNNQGGNNGNFGNNSGPSNFGNFGGGNNGGNSGNFGNDSGN--SGNFGNFGNNGGGNF 350
Fly 351 GGNNNGGGGFNSGNNFNSPGGVNNFGNNGGSNFGGNGGGGFNNGGNFVSSSGVGNFGPIGGGRNN 415
Fly 416 NNGNFGNSGFGNFGGNNNVGSNFGGGNNGGGGGFNNGSNFGGGNSMGGGGNFGPIGGGRGNDIEY 480
Fly 481 YTIHMRGLPYTSFENDVFKFFEPIRPANVRINYNKKGLHSGTADAYFDTYEDSQVAMKRHREQMG 545
Fly 546 SRYIELFYDGKTRGLNGG------------------------EHGGGNGGGGMGNNGGGNF 582 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
glo | NP_650120.1 | RRM_SF | 51..125 | CDD:302621 | 34/73 (47%) |
RRM2_hnRNPH_like | 146..224 | CDD:240948 | 41/77 (53%) | ||
RRM3_hnRNPH_CRSF1_like | 481..555 | CDD:240950 | 33/73 (45%) | ||
Hnrnpf | NP_001032362.1 | RRM1_hnRNPH_hnRNPH2_hnRNPF | 10..88 | CDD:410128 | 37/87 (43%) |
Interaction with RNA. /evidence=ECO:0000250 | 81..86 | 4/4 (100%) | |||
RRM2_hnRNPH_hnRNPH2_hnRNPF | 103..192 | CDD:410130 | 45/90 (50%) | ||
Interaction with RNA. /evidence=ECO:0000250 | 179..184 | 4/4 (100%) | |||
zf-RNPHF | 255..290 | CDD:369688 | 11/159 (7%) | ||
RRM3_hnRNPH_CRSF1_like | 289..363 | CDD:409929 | 33/73 (45%) | ||
Interaction with RNA. /evidence=ECO:0000250 | 355..360 | 4/4 (100%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166349096 | |
Domainoid | 1 | 1.000 | 78 | 1.000 | Domainoid score | I8550 |
eggNOG | 1 | 0.900 | - | - | E1_KOG4211 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 241 | 1.000 | Inparanoid score | I3250 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D392876at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000855 | |
OrthoInspector | 1 | 1.000 | - | - | otm46264 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_102542 | |
Panther | 1 | 1.100 | - | - | O | PTHR13976 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X436 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
12 | 11.800 |