Sequence 1: | NP_650120.1 | Gene: | glo / 41431 | FlyBaseID: | FBgn0259139 | Length: | 586 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005165391.1 | Gene: | grsf1 / 563249 | ZFINID: | ZDB-GENE-060825-196 | Length: | 403 | Species: | Danio rerio |
Alignment Length: | 537 | Identity: | 123/537 - (22%) |
---|---|---|---|
Similarity: | 192/537 - (35%) | Gaps: | 238/537 - (44%) |
- Green bases have known domain annotations that are detailed below.
Fly 24 NQQQDEDDQY---NEDGGGKIENVGESPKFVRLRGLPWSATHKEILDFLENVNVTNGSAGIHLVT 85
Fly 86 SRVDGKNTGEAYVEVASQEDVEEARKLNKASMGHRYIEVFTATPKEAKEAMRKISGH--GTAFVV 148
Fly 149 KLRGLPYAVTEQQIEEFFSGLDIKTDREGILFVMDRRGRATGEAFVQFESQDDTEQALGRNREKI 213
Fly 214 GHRYIEIF---RSSIAEMKRATGAGGGVGGRPGPYDIRDRGANRGGNDFGGGRNDWGNNGNFGVG 275
Fly 276 ANNMLGFNNLPSLMNSGNFGNNQGGNNGNFGNNSGPSNFGNFGGGNNGGNSGNFGNDSGNSGNFG 340
Fly 341 NFGNNGGGNFGGNNNGGGGFNSGNNFNSPGGVNNFGNNGGSNFGGNGGGGFNNGGNFVSSSGVGN 405
Fly 406 FGPIGGGRNNNNGNFGNSGFGNFGGNNNVGSNFGGGNNGGGGGFNNGSNFGGGNSMGGGGNFGPI 470
Fly 471 GGGRGNDIEYYTIHMRGLPYTSFENDVFKFFEPIRPANVRINYNKKGLHSGTADAYFDTYEDSQV 535
Fly 536 AMKRHREQMGSRYIELF 552 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
glo | NP_650120.1 | RRM_SF | 51..125 | CDD:302621 | 24/73 (33%) |
RRM2_hnRNPH_like | 146..224 | CDD:240948 | 39/80 (49%) | ||
RRM3_hnRNPH_CRSF1_like | 481..555 | CDD:240950 | 32/72 (44%) | ||
grsf1 | XP_005165391.1 | RRM | 106..403 | CDD:223796 | 118/518 (23%) |
RRM1_GRSF1 | 114..192 | CDD:241174 | 25/78 (32%) | ||
RRM2_GRSF1 | 211..285 | CDD:240949 | 37/75 (49%) | ||
RRM_SF | 324..396 | CDD:302621 | 32/70 (46%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170590303 | |
Domainoid | 1 | 1.000 | 78 | 1.000 | Domainoid score | I8693 |
eggNOG | 1 | 0.900 | - | - | E1_KOG4211 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 208 | 1.000 | Inparanoid score | I3674 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D392876at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000855 | |
OrthoInspector | 1 | 1.000 | - | - | otm25364 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR13976 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X436 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
10 | 9.900 |