Protein Alignment glo and rbm12bb

DIOPT Version :10

• Sequence 1: NP_650120.1
• Gene: glo / 41431
• FlyBaseID: FBgn0259139
• Length: 586
• Species: Drosophila melanogaster
• Sequence 2: NP_001277069.2
• Gene: rbm12bb / 334496
• ZFINID: ZDB-GENE-030131-6428
• Length: 675
• Species: Danio rerio
• Alignment Length: 729
• Identity: 136/729 - (18%)
• Similarity: 229/729 - (31%)
• Gaps: 287/729 - (39%)

  Fly    51 VRLRGLPWSATHKEILDFLENVNVTNGSAGIHLVTSRVDGKNTGEAYVEVASQEDVEEARKLNKA 115
            :||:||..:|..::|.:|...:.:.:|  |:|::     |....||::..||.||...|...:..
Zfish     5 IRLQGLRVTAGSEDIRNFFTGLRIPDG--GVHII-----GGELEEAFIIFASDEDARRAMSRSGG 62

  Fly   116 SMGHRYIEVFTATPKEA-------------------KEAMRKISGH------------------- 142
            .:....:.:|.::..|.                   ||.:::.|..
Zfish    63 CIKGSTVNLFLSSKSEMQSVLEESTRRSELKNRAMYKEPVKRASAEQGPLPFSKDTRPDVRRADH 127

  Fly   143 --------------------GTA-----FVVKLRGLPYAVTEQQIEEFFSGLDIKTDREGILFVM 182
                                |.|     ..:||.|:|::.|:..:..||:||.:    :.|||:.
Zfish   128 PEMRGRPAPSTFNEARRQRDGDAPERAEVYLKLTGMPFSATKDNVHNFFAGLKV----DDILFLK 188

  Fly   183 DRRGRATGEAFVQFESQDDTEQALGRNREKIGHRYIEIFRSS------------IAEMKRATGAG 235
            :.||..:|.:.|:|.:::|..:.|.|:|:.:|.|||:|.|.:            .|:|::.|..
Zfish   189 NPRGMFSGNSMVRFTTKEDAIEGLKRDRQYMGSRYIQITRCTEEEWLKEGGLIVAADMRKRTPV- 252

  Fly   236 GGVGGRPGPYDIRDRGANRGGNDFGGGRNDWGNNGNFGVGANNMLGFNNLPSLMNSGN------- 293
            ..|..| .|...|.|..:....::                   .:.|.|||.|:...:
Zfish   253 ERVRSR-SPISYRSRSRSPSHEEY-------------------CIMFENLPPLVEKRDVRVFLQP 297

  Fly   294 ----------FGNNQGGNNGNFGNNSGPSNFGNFGGGNNGGNSGNFGND--SGNSGNFGNFGN-- 344
                      |.:.:...     :.|....|.:.             .|  :|.:.|.....|
Zfish   298 VALKDDQIIIFSSKKDDK-----SKSAVVVFRSL-------------TDYCAGLAHNKEMMYNKV 344

  Fly   345 -------------------NGGGNFGGNNNGGGGFNSGNNF-----------NSPGGVN-----N 374
                               :..|...|:........|..|.           |.|..|.     :
Zfish   345 VYVSPISKEKMVTMLESSIDARGEEKGSRRSAEASQSQRNTPDSQLRCLYVRNLPFDVRKVEIMD 409

  Fly   375 FGNNGGSNFGG-------------NGGGGFN------------------NGGNFVSS-------- 400
            |       |.|             ..|.|..                  ||..|:.|
Zfish   410 F-------FHGYALTEDRVILLRDERGAGLGEALVIFQTEKEAMTGQSLNGQRFLGSEVMLKCIT 467

  Fly   401 -SGVGNFG----PIGG-------GRNNNNGNFGNSGF------------GNFGGNNNVGSNFGGG 441
             |.:..||    |:..       .||..:.||.:..|            .||...|....||...
Zfish   468 MSQMAQFGVNDQPMVSPQERNFQDRNFQDRNFQDRNFQERNFQERNFQERNFQDRNFQDRNFEER 532

  Fly   442 NNGGGGGFNNGSNFGGGNSM-------------GGGG------NFGPIGGGRGNDIEYY------ 481
            |.....|||:|..| ..|.|             |.||      ||||  |..||..::|
Zfish   533 NFQRNEGFNDGPGF-VNNQMPQGDFEMPPNMHQGYGGHKHFEPNFGP--GPDGNGRQHYEPPDAQ 594

  Fly   482 -----TIHMRGLPYTSFENDVFKFFEPIR--PANVRINYNKKGLHSGTADAYFDTYEDSQVAMKR 539
                 .:.:..||......:::.|....|  |.:..:.:::.|....:|...||.:.::.||::.
Zfish   595 FDAPTCVKLVNLPSQIRIEEIYDFCYGYRVIPGSASLLFDRNGAPKRSATIAFDNHREALVAVRE 659

  Fly   540 -HREQMGSRYIELF 552
             :...:|:|.|::|
Zfish   660 LNGRPIGTRKIQVF 673

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
glo	NP_650120.1	RRM_hnRNPH_ESRPs_RBM12_like	50..125	CDD:409699	18/73 (25%)
		RRM2_hnRNPH_CRSF1_like	146..224	CDD:409927	27/77 (35%)
		RRM3_hnRNPH_CRSF1_like	481..555	CDD:409929	16/86 (19%)
rbm12bb	NP_001277069.2	None