Sequence 1: | NP_650120.1 | Gene: | glo / 41431 | FlyBaseID: | FBgn0259139 | Length: | 586 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001277069.1 | Gene: | rbm12bb / 334496 | ZFINID: | ZDB-GENE-030131-6428 | Length: | 685 | Species: | Danio rerio |
Alignment Length: | 625 | Identity: | 122/625 - (19%) |
---|---|---|---|
Similarity: | 208/625 - (33%) | Gaps: | 206/625 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 45 GESPK----FVRLRGLPWSATHKEILDFLENVNVTNGSAGIHLVTSRVDGKNTGEAYVEVASQED 105
Fly 106 VEEARKLNKASMGHRYIEVFTATPKE-AKEA-------MRK------------ISGHGTA----- 145
Fly 146 --FVVKLRGLPYAVTEQQIEEFFSGLDIKTDREGILFVMDRRGRATGEAFVQFESQDDTEQALGR 208
Fly 209 NREKIGHRYIEIFRSSIAEMKRAT-------GAGGGVGGRPG----------------------- 243
Fly 244 PYDIR-----------------------DRGANRG--------------GNDFGGGRNDWGNNGN 271
Fly 272 FGVGANNMLGFNNLPSLMNSGNFGNNQGGNNGNFGNNSGP------SNFGNFGGGNNGGNSGNFG 330
Fly 331 NDSGNSGNF--GNFGNNGGGNFGGNNNGGGGFNSGNNFNSPGGVNNFGNNGGSNFGGNGGGGFNN 393
Fly 394 GGNFVSSS-GVGNFGPIGGGRNNNNGNFGNSGFGNFGGNNNVGSNFGGGNNGGGGGFNNGSNFGG 457
Fly 458 GNSMGGGGNFGPIGGGRGN----DIEY---YTIHMRGLPYTSFENDVFKFFEPIR--PANVRINY 513
Fly 514 NKKGLHSGTADAYFDTYEDSQVAMKR-HREQMGSRYIELF 552 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
glo | NP_650120.1 | RRM_SF | 51..125 | CDD:302621 | 21/73 (29%) |
RRM2_hnRNPH_like | 146..224 | CDD:240948 | 15/77 (19%) | ||
RRM3_hnRNPH_CRSF1_like | 481..555 | CDD:240950 | 15/75 (20%) | ||
rbm12bb | NP_001277069.1 | RRM1_RBM12B | 2..80 | CDD:241188 | |
RRM2_RBM12B | 157..234 | CDD:241190 | 22/81 (27%) | ||
RRM_SF | 275..355 | CDD:302621 | 17/83 (20%) | ||
RRM | <352..559 | CDD:223796 | 43/247 (17%) | ||
RRM_SF | 391..466 | CDD:302621 | 13/83 (16%) | ||
RRM | 521..>682 | CDD:223796 | 42/217 (19%) | ||
RRM5_RBM12_like | 609..683 | CDD:240959 | 14/73 (19%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170590317 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |