Protein Alignment glo and Grsf1

DIOPT Version :9

• Sequence 1: NP_650120.1
• Gene: glo / 41431
• FlyBaseID: FBgn0259139
• Length: 586
• Species: Drosophila melanogaster
• Sequence 2: NP_001094360.1
• Gene: Grsf1 / 305256
• RGDID: 1310858
• Length: 479
• Species: Rattus norvegicus
• Alignment Length: 529
• Identity: 123/529 - (23%)
• Similarity: 199/529 - (37%)
• Gaps: 199/529 - (37%)

  Fly    38 GGKIENVGESPKFVRLRGLPWSATHKEILDFLENVNVTNGSAGIHLVTSRVDGKNTGEAYVEVAS 102
            |.::::|    ..:|.:|||||.|.:::|.|..:..:.|...|||.:.:| |||..|:|.:|:.|
  Rat   142 GEEVDDV----YLIRAQGLPWSCTVEDVLSFFSDCRIRNSENGIHFLLNR-DGKRRGDALIEMES 201

  Fly   103 QEDVEEARKLNKASMGHRYIEVFTATPKEAKEAMRKISGHGTAF----VVKLRGLPYAVTEQQIE 163
            ::||::|.:.::..||.||:||:....::....|:.:....|..    ||:||||||:..|:.|.
  Rat   202 EQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMKSLQVKPTPALSDGVVRLRGLPYSCNEKDIV 266

  Fly   164 EFFSGLDIKTDREGILFVMDRRG-RATGEAFVQFESQDDTEQALGRNREKIGHRYIEIFRSSIAE 227
            :||:||:|    ..|.||||.|| |.||||:||||..:...|||.::||:||:||||||.|...|
  Rat   267 DFFAGLNI----VDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNE 327

  Fly   228 MKRATGA--GGGVGGRPGPYDIRDRGANRGGNDFGGGRNDWGNNGNFGVGANNMLGFNNLPSLMN 290
            ::...|:  |..:...|....|.:                                    |.::
  Rat   328 VRTHVGSHKGKKMVSSPTTKYITE------------------------------------PEVV- 355

  Fly   291 SGNFGNNQGGNNGNFGNNSGPSNFGNFGGGNNGGNSGNFGNDSGNSGNFGNFGNNGGGNFGGNNN 355
               |..::      ...::.|..
  Rat   356 ---FEEHE------VNEDARPMT------------------------------------------ 369

  Fly   356 GGGGFNSGNNFNSPGGVNNFGNNGGSNFGGNGGGGFNNGGNFVSSSGVGNFGPIGGGRNNNNGNF 420
               .|.|......|..::
  Rat   370 ---AFESEKEIELPKEMS----------------------------------------------- 384

  Fly   421 GNSGFGNFGGNNNVGSNFGGGNNGGGGGFNNGSNFGGGNSMGGGGNFGPIGGGRGNDIEYYTIHM 485
                                                  :.:....:||.:.       ..:.:||
  Rat   385 --------------------------------------DKLAEAVDFGAVP-------SLHFVHM 404

  Fly   486 RGLPYTSFENDVFKFFEPIRPANVRINYNKKGLHSGTADAYFDTYEDSQVAMKRHREQMGSRYIE 550
            ||||:.:...|:..||.|::|..:.:.|:..|..:|.||.:|||:||:..||.:.|..:..||||
  Rat   405 RGLPFQANAQDIINFFAPLKPVRITMEYSSSGKATGEADVHFDTHEDAVAAMLKDRSHVQHRYIE 469

  Fly   551 LFYDGKTRG 559
            ||.:...:|
  Rat   470 LFLNSCPKG 478

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
glo	NP_650120.1	RRM_SF	51..125	CDD:302621	29/73 (40%)
		RRM2_hnRNPH_like	146..224	CDD:240948	44/82 (54%)
		RRM3_hnRNPH_CRSF1_like	481..555	CDD:240950	30/73 (41%)
Grsf1	NP_001094360.1	RRM1_GRSF1	148..226	CDD:241174	31/82 (38%)
		RRM2_GRSF1	248..321	CDD:240949	42/76 (55%)
		RRM	328..>458	CDD:223796	35/312 (11%)
		RRM3_GRSF1	400..474	CDD:241177	30/73 (41%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166349100
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG4211
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D392876at33208
OrthoFinder	1	1.000	-	-		FOG0000855
OrthoInspector	1	1.000	-	-		otm46264
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR13976
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X436
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	8	7.850