Sequence 1: | NP_650120.1 | Gene: | glo / 41431 | FlyBaseID: | FBgn0259139 | Length: | 586 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038941022.1 | Gene: | Hnrnph1 / 140931 | RGDID: | 620840 | Length: | 472 | Species: | Rattus norvegicus |
Alignment Length: | 570 | Identity: | 165/570 - (28%) |
---|---|---|---|
Similarity: | 243/570 - (42%) | Gaps: | 200/570 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 51 VRLRGLPWSATHKEILDFLENVNVTNGSAGIHLVTSRVDGKNTGEAYVEVASQEDVEEARKLNKA 115
Fly 116 SMGHRYIEVFTATPKEAKEAMRKISGHG--TA--FVVKLRGLPYAVTEQQIEEFFSGLDIKTDRE 176
Fly 177 GILFVMDRRGRATGEAFVQFESQDDTEQALGRNREKIGHRYIEIFRSSIAEMK------RATGAG 235
Fly 236 GGVGGRPGPYDIRDRGANRGGNDFGGGRNDWGNNGNFGVGANNMLGFNNLPSLMNSGNFGNNQGG 300
Fly 301 NNGNFGNNSGPSNFGNFGGGNNGGNSGNFGNDSGNSGNFGNFGNNGGGNFGGNNNGGGGFNSGNN 365
Fly 366 FNSPGGVNNFGNNGGSNFGGNGGGGFNNGGN-FVSSSGVGNFGPIGGGRNNNNGNFGNSGFGNFG 429
Fly 430 GNNNVGSNFGGGNNGGGGGFNNGSNFGGGNSMGGGGNFGPIGGGRGNDIEYYTIHMRGLPYTSFE 494
Fly 495 NDVFKFFEPIRPANVRINYNKKGLHSGTADAYFDTYEDSQVAMKRHREQMGSRYIELFYDGKTRG 559
Fly 560 LNGG--EH----------GGGNGG-------GGMG----NNGGGNFSRRI 586 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
glo | NP_650120.1 | RRM_SF | 51..125 | CDD:302621 | 30/73 (41%) |
RRM2_hnRNPH_like | 146..224 | CDD:240948 | 41/77 (53%) | ||
RRM3_hnRNPH_CRSF1_like | 481..555 | CDD:240950 | 32/73 (44%) | ||
Hnrnph1 | XP_038941022.1 | RRM1_hnRNPH_hnRNPH2_hnRNPF | 10..88 | CDD:410128 | 32/75 (43%) |
RRM2_hnRNPH_hnRNPH2_hnRNPF | 103..192 | CDD:410130 | 47/90 (52%) | ||
zf-RNPHF | 255..290 | CDD:369688 | 11/116 (9%) | ||
RRM3_hnRNPH_hnRNPH2_hnRNPF | 289..364 | CDD:410133 | 32/75 (43%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 78 | 1.000 | Domainoid score | I8550 |
eggNOG | 1 | 0.900 | - | - | E1_KOG4211 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 241 | 1.000 | Inparanoid score | I3250 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D392876at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000855 | |
OrthoInspector | 1 | 1.000 | - | - | otm46264 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_102542 | |
Panther | 1 | 1.100 | - | - | O | PTHR13976 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X436 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
11 | 10.870 |