DRSC/TRiP Functional Genomics Resources

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Protein Alignment glo and LOC1269910

DIOPT Version :10

Sequence 1:NP_650120.1 Gene:glo / 41431 FlyBaseID:FBgn0259139 Length:586 Species:Drosophila melanogaster
Sequence 2:XP_001688002.2 Gene:LOC1269910 / 1269910 VectorBaseID:AGAMI1_013780 Length:1198 Species:Anopheles gambiae


Alignment Length:637 Identity:153/637 - (24%)
Similarity:231/637 - (36%) Gaps:199/637 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 NYGQQGNGDNFNDDSNQQQDEDDQYNEDGGGKIENVGESPKFVRLRGLPWSATHKEIL----DF- 68
            |.|:.|.|...:.|..:..|:.|:...|.|.:...|..|...| :..||...|.::|:    || 
Mosquito   644 NEGRNGGGRAGSSDVIEIADDRDEPRHDSGRRPPPVAASSALV-VWNLPTFTTEQDIMKMFSDFT 707

  Fly    69 -LENVNVTNGSAGIHLVTSRVDGKNTGEAYVEVASQEDVEEA-RKLNKASMGHRYIEVFTA---- 127
             :|.:.|.|     |....::||      ||:...|||.:|| :::::..:|::.:.|...    
Mosquito   708 VVEVLIVKN-----HHAPKQLDG------YVKFHRQEDAQEAWKQVHRHFIGNKKVTVLVCQEID 761

  Fly   128 ---------TPKEAKEAMRKISGHGTAFVVKLRGLPYAVTEQQIEEFFSGLDIKTDREGILFVMD 183
                     .|::.:|:        ::|            |||.::   ..|.:.:||       
Mosquito   762 YEVAKNEHENPRDVEES--------SSF------------EQQQQQ---NADGQMERE------- 796

  Fly   184 RRGRATGEAFVQFESQDDTEQALGRNR------EKIGHRYIEI-------------FRSSIAEMK 229
            |.|...|::..| ||.:.:....|.|.      .|.|.|:..:             .::.:.|.:
Mosquito   797 RTGSENGQSEEQ-ESVNGSSSGNGGNNGRQGRSSKHGSRWGSVERPWDDDTSENIALKNMMLEAQ 860

  Fly   230 R---ATGAGGGVGGRPGPYDIRDRGANRGGNDFGGGRNDWGNNGNFGVGANNMLGFNNLPSLMNS 291
            |   |..||.......||:::||...:| ||..|   ||..||||...|..:....||: .:||.
Mosquito   861 RRMNAEAAGAANAESNGPWNVRDDRMSR-GNSLG---NDSDNNGNSNGGNQSNEAINNM-QIMNF 920

  Fly   292 GNFGNNQGGNNGNFGNNSGPSNFGNFGGGNN----GGNSGNF--GNDSG---------------- 334
            .| ..||..|||| ||......  ..||||:    ..|| .|  .|||.                
Mosquito   921 IN-NMNQMNNNGN-GNQQQQQQ--QQGGGNSRDPRRANS-RFAPSNDSSEMFQRTNWLLLRNVDF 980

  Fly   335 ---NSGNFGNFGNNGGGNFGGNN-----NGGGGFNSGN---NFNSPGGVNNFGNNGGSNFGGNGG 388
               ....|..||::|   |...|     |..|| .:|.   .|.|.....:..:....|.|    
Mosquito   981 HVYEEDVFAFFGHDG---FQAKNVLLVHNERGG-RTGECLVEFGSASEAAHAESKSSQNLG---- 1037

  Fly   389 GGFNNGGNFVSSSGVG-------NFGPIGGG-----------RNNNNGNFGNSGFGNFGGNNNVG 435
                ....|.|....|       .|..|..|           ||.|:.                 
Mosquito  1038 ----RRKVFASHLDRGQVADLMARFHAIAQGLQPSHWLPDHLRNENSN----------------- 1081

  Fly   436 SNFGGGNNGGGGGFNNGSNFGGGNSMGGGGNFGP-----IGGGRGNDIEYYTIHMRGLPYTSFEN 495
               |||.:|||||       |||:..||..|..|     :|.|   .....|:.:..|.|.:...
Mosquito  1082 ---GGGGSGGGGG-------GGGSGSGGSQNDDPEKNQGVGCG---PYRTSTVGLLNLAYKTTVE 1133

  Fly   496 DVFKFFE----PIRPANVRINYNKKGLHSGTADAYFDTYEDSQVAMKRHREQ 543
            ||.|||:    |:.  |:|..:...|..:|.|...|..::|::.|:..::.:
Mosquito  1134 DVQKFFQEFNLPLE--NIRRRFLDNGNATGEAMVRFRNHQDAEKALNEYQNR 1183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gloNP_650120.1 RRM_hnRNPH_ESRPs_RBM12_like 50..125 CDD:409699 21/81 (26%)
RRM2_hnRNPH_CRSF1_like 146..224 CDD:409927 18/96 (19%)
RRM3_hnRNPH_CRSF1_like 481..555 CDD:409929 17/67 (25%)
LOC1269910XP_001688002.2 None

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