Sequence 1: | NP_650120.1 | Gene: | glo / 41431 | FlyBaseID: | FBgn0259139 | Length: | 586 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031748425.1 | Gene: | grsf1 / 100337653 | XenbaseID: | XB-GENE-965150 | Length: | 440 | Species: | Xenopus tropicalis |
Alignment Length: | 532 | Identity: | 133/532 - (25%) |
---|---|---|---|
Similarity: | 193/532 - (36%) | Gaps: | 225/532 - (42%) |
- Green bases have known domain annotations that are detailed below.
Fly 51 VRLRGLPWSATHKEILDFLENVNVTNGSAGIHLVTSRVDGKNTGEAYVEVASQEDVEEARKLNKA 115
Fly 116 SMGHRYIEVFTATPKEAKEAMRKISGHGTAF----------------------VVKLRGLPYAVT 158
Fly 159 EQQIEEFFSGLDIKTDREGILFVMDRRGRATGEAFVQFESQDDTEQALGRNREKIGHRYIEIFRS 223
Fly 224 SIAEMKRATGAGGGVGGRPGPYDIRDRGANRGGNDFGGGRNDWGNNGNFGVGANNMLGFNNLPSL 288
Fly 289 MNSGNFGNNQGGNNGNFGNNSGPSNFGNFGGGNNGGNSGNFGNDSGNSGNFGNFGNNGGGNFGGN 353
Fly 354 NNGGGGFNSGNNFNSPGGVNNFGNNGGSNFGGNGGGGFNNGGNFVSSSGVGNFGPIGGGRNNNNG 418
Fly 419 NFGNSGFGNFGGNNNVGSNFGGGNNGGGGGFNNGSNFGGGNSMGGGGNFGPIGGGRGNDIEYYT- 482
Fly 483 ------IHMRGLPYTSFENDVFKFFEPIRPANVRINYN-KKGLHSGTADAYFDTYEDSQVAMKRH 540
Fly 541 REQMGSRYIELF 552 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
glo | NP_650120.1 | RRM_SF | 51..125 | CDD:302621 | 35/73 (48%) |
RRM2_hnRNPH_like | 146..224 | CDD:240948 | 47/99 (47%) | ||
RRM3_hnRNPH_CRSF1_like | 481..555 | CDD:240950 | 28/80 (35%) | ||
grsf1 | XP_031748425.1 | RRM1_GRSF1 | 93..171 | CDD:410129 | 37/75 (49%) |
RRM2_GRSF1 | 209..286 | CDD:409928 | 47/78 (60%) | ||
RRM3_GRSF1 | 360..435 | CDD:410132 | 27/73 (37%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 82 | 1.000 | Domainoid score | I8281 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 210 | 1.000 | Inparanoid score | I3576 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D392876at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000855 | |
OrthoInspector | 1 | 1.000 | - | - | otm49347 | |
Panther | 1 | 1.100 | - | - | O | PTHR13976 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X436 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
8 | 8.070 |