DRSC/TRiP Functional Genomics Resources

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Protein Alignment ClC-a and SPBC887.02

DIOPT Version :9

Sequence 1:NP_788639.1 Gene:ClC-a / 41428 FlyBaseID:FBgn0051116 Length:1193 Species:Drosophila melanogaster
Sequence 2:NP_596476.2 Gene:SPBC887.02 / 2541132 PomBaseID:SPBC887.02 Length:696 Species:Schizosaccharomyces pombe


Alignment Length:699 Identity:170/699 - (24%)
Similarity:293/699 - (41%) Gaps:169/699 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 ALLGIIMALL----------SFIMDKGISICTNARIWLYRDLTSQP----------FVQYIAWVS 220
            |||..:.:||          :.:.||.....|     |..|...|.          ||..:.:||
pombe    52 ALLNALASLLNSFREGYCTVNILFDKQTCCST-----LTEDYECQEFFFWRNNHSVFVSCLIYVS 111

  Fly   221 LPVCLILFSAGFVHLIAPQSIGSGIPEMKTILRGVQ---LKEYLTFKTLVAKVIGLTATLGSGMP 282
            :.|.....:....:::||.:..||||.:|.||.|.:   :..:.:.|||.:|.:.:..::.||:.
pombe   112 VSVGFAFIATTLGYVVAPAARASGIPTIKAILSGYKYPDMNVFFSIKTLCSKSLAVCFSVASGLW 176

  Fly   283 LGKEGPFVHIASIVAQLLSKLVTSFQGIYENESRNSEMLAAACAVGVGACFAAPVGGVLFSIE-V 346
            :||||||||||:.:..|:.::..|   :.::|....::||||.|.|:.|.|.||||||:|::| :
pombe   177 VGKEGPFVHIATNIIYLVERIAPS---LADSEIFTRQLLAAAMASGIAASFNAPVGGVIFALEQL 238

  Fly   347 TTTYFA---VRNYWRGFFAAVCGATVFRLLAVWFQNADTVRALFLTNFTTEFPFDPQELFVFALI 408
            .::.|.   ..:.|..|..:.......:|:..|..:..     :|:..:.:..:..::...|..|
pombe   239 ASSSFPSLFTGSIWYEFLCSASSVVALQLIRSWHTDVG-----YLSYVSLDRRWSYKDTLPFIFI 298

  Fly   409 GLVCGLGGASYVWVHRRYVLFMRSNKRMNKFLQKNRFLYPGFLALLVSSISFP-LGTGQFLAGEL 472
            .::||..|:..::::.::.      .:...|.:.:...:..||:|:.|..::. ||..:.|...:
pombe   299 SILCGCLGSVLIYLNMKFA------SKTKGFSKISNVFFVIFLSLITSLTAYAILGESELLFNPM 357

  Fly   473 STHEQVTQLFSNFTWSRDDLTVEQAAVVTHWMTS---YTSVFGNLVIYTLFTFVVSIIASTIPVP 534
            ....||..     :.|....||  ....|.|:|:   :||....|:: |..||..:|       |
pombe   358 ELFPQVIN-----SCSPSSSTV--LCETTFWVTAIVLFTSALLGLLL-TSATFGAAI-------P 407

  Fly   535 SGMFIPVFKIGAGFGRLVGEFMAVTFPHGVRYGGRLSPIMPGG--YAVVGAAAFSGSVTH-TVSV 596
            :|:.:|...|||..||.||..:...||.           :.|.  |.|:|:.||..|.|. .|::
pombe   408 TGIIVPSLAIGACIGRAVGTLLKSRFPS-----------LAGTSIYGVIGSIAFLSSTTRLVVAL 461

  Fly   597 AVIIFEMTGQITHVVPVMIAVLVANAVA-ALLQPSIYDSIILIKKLPYLPDLLPSSSGMYSIFVE 660
            .||:||:||.:...:|:|:|.|::..|: ::::.||||:.|..:.:||.|               
pombe   462 VVILFELTGALNIALPLMLATLISKWVSDSIIETSIYDAWIQFRNIPYFP--------------- 511

  Fly   661 DFMVRDVKYIWHGISYQKLKEVLKLNKTLRSLPLVDSPDNMILLGSVQRYELIKMIEKHIGREKR 725
                          |...||..:.||..:|      ||:.::                      |
pombe   512 --------------SSNSLKFSIPLNFPVR------SPEQLV----------------------R 534

  Fly   726 MEVAQKWQKEAQERALEEEKKKQEVELK---------MRRPSRFEVLPAPDILSLRQIANDEMLP 781
            :.: :....|..|||:.:..:...|.||         :.|....|:|....:.|..|..::..|.
pombe   535 LPI-RSCSIEELERAMHDSSQSFFVVLKNDTEFFEGFISRNKVSELLNRRPMSSNMQTTDNTGLD 598

  Fly   782 PKKRAETMHGSLAPRKSILKKTNSFNLKTYAQPMGHSPSITPYTTITGN 830
            |.:.|.      ||..|      :|:|..|..|          ||.|.|
pombe   599 PLRSAS------APVDS------TFDLFDYIHP----------TTFTLN 625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClC-aNP_788639.1 ClC_1_like 171..646 CDD:239655 134/504 (27%)
Voltage_CLC 227..615 CDD:279048 107/401 (27%)
CBS_pair_EriC_assoc_euk_bac 1000..1096 CDD:239964
SPBC887.02NP_596476.2 ClC_3_like 105..509 CDD:239656 119/443 (27%)
Voltage_CLC 115..490 CDD:279048 111/414 (27%)
CBS_pair 541..665 CDD:239067 26/107 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0038
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X544
TreeFam 00.000 Not matched by this tool.
32.810

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