DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sbf and mtmr12

DIOPT Version :9

Sequence 1:NP_477401.2 Gene:Sbf / 41427 FlyBaseID:FBgn0025802 Length:1993 Species:Drosophila melanogaster
Sequence 2:XP_009299937.1 Gene:mtmr12 / 569130 ZFINID:ZDB-GENE-050401-1 Length:753 Species:Danio rerio


Alignment Length:697 Identity:148/697 - (21%)
Similarity:263/697 - (37%) Gaps:224/697 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   903 IESLEPVYLEAKRHPHVQKPKIQTPCLLPGEDLVTDHLRCFLMP---DGREDETQCLIPAEGALF 964
            :..:.|..::.::.|  || |.:.|.|||||.:.     |...|   ..::|.:|..:  .|.|.
Zfish    17 VSYVTPEEIKLEKDP--QK-KEKHPDLLPGEVVF-----CSANPILKYTQDDLSQRGV--FGTLL 71

  Fly   965 LTNYRVIFKGSPCDPLFCEQVIVRTFPIASLLKEKKISVLYLAHL-------DQTLTEGLQLRSS 1022
            .||:||.|......    ::.:.:||. ..|..|..|.::.:.|:       .:.:|.||.....
Zfish    72 CTNFRVAFISDDAP----QEEMSKTFK-NKLYGENDIPLMCVDHIYGVYDEKRKLITGGLVKNKC 131

  Fly  1023 SFQLIKVAFDPEVTPEQIESFRKILSKARHPFDEFEYFAFQSYGTMLQGVAPLKTKEKYSTLKGF 1087
            ..::|       :..:.:..|:..|:.::.          :....:.||:|....:||  :||..
Zfish   132 PSKMI-------IHCKDLRVFQFCLTFSKE----------EDAKRIFQGIAHHCLEEK--SLKCV 177

  Fly  1088 AKKTLLRGAKKAGFKQKQQTKRKLVSDYDYGSADAQETQSIDDELEDGDEFETQNNAMPRLLTTK 1152
            ...:.||.                 ::.|:|                    ::....:.||.:..
Zfish   178 FAFSYLRS-----------------TNPDHG--------------------KSSRKCITRLDSKS 205

  Fly  1153 DVERMRE-------RSYVQDWKRLGFDAESQRGFRISNANTSYATCRSYPAIIVAPVQCSDAAIM 1210
            ::.|.||       ..:.|:.||      ::...|:...|.::...:..|...|.|....|..  
Zfish   206 EMLRKREAIMFDSPEDWTQEMKR------TKAQCRLVTENENFELSQRLPQYFVIPSALGDLF-- 262

  Fly  1211 HLGRCFKGQRIPLPTWRHANGALLIRGGQPNSKSVIGMLKNTTGSTTNAHHDVTHYPEQDKYFLA 1275
                .::|:.:|:..|.|.:|..|.:...|:                        ..::|..|.:
Zfish   263 ----NYQGKGLPIWCWSHHSGCALFKASFPS------------------------MTQEDGDFQS 299

  Fly  1276 LINTMPKLTPLALNQYSGMNLSMSSLMGHSSSDDRQPLTPELSRKHKNNLDISDGNKSSQGGKGG 1340
            .::||  :|.:|.|.                                                  
Zfish   300 HLDTM--ITAVARNY-------------------------------------------------- 312

  Fly  1341 TMKGNPKNSLAHPFRKMRLYALGEKSQAKSNMNVDFCADFIPVDYPDIRQSRPAFKK--LIRACM 1403
                              ||::..:..::|          :|. ..||:||...||:  ||    
Zfish   313 ------------------LYSVKTEDLSES----------LPT-LQDIQQSYNKFKQYFLI---- 344

  Fly  1404 PSHNTNE---ADGQSFAKMVEQSDWLQQISSLMQLSGAVVDLIDLQESSVMLSLEDGSDVTAQLS 1465
              .||.:   :|.:.|:.: |.|.||..|...:|.:..||:.::...::|:::.|:|:|:...:|
Zfish   345 --DNTTDFWLSDVKWFSSL-ESSGWLDIIRQCLQKAVEVVECLEKDNTNVLITEEEGTDLCCVIS 406

  Fly  1466 SIAQLCLDPYYRSLDGFRVLVEKEWLAFGHRFAHRSNLKPSHANTNIAFAPTFLQFLDVVHQLQR 1530
            |:||:.||||||:|.||:.||:|||:|..|.|..|.|  ..|.......:|.||.||:.|.||.:
Zfish   407 SLAQIMLDPYYRTLMGFQSLVQKEWVAGCHAFLDRCN--HLHQKDKECHSPVFLLFLECVWQLVQ 469

  Fly  1531 QFPMAFEFNDFYLRFLAYHSVSCRFRTFLFDC-----ELERSDSGIA 1572
            |...||:|::.||..|:.......|.||||:.     .:.:::|.||
Zfish   470 QHSPAFQFSETYLTVLSDSVHVPIFSTFLFNSAHHRESVMKAESPIA 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SbfNP_477401.2 uDENN 1..91 CDD:214824
DENN 142..325 CDD:280329
dDENN 384..452 CDD:129037
SBF2 585..807 CDD:289132
PH-GRAM_MTMR5_MTMR13 933..1047 CDD:275396 23/123 (19%)
Myotub-related 1161..1565 CDD:284109 95/413 (23%)
C1 1791..1838 CDD:237996
PH_Sbf1_hMTMR5 1888..1993 CDD:269941
PH 1891..1992 CDD:278594
mtmr12XP_009299937.1 PH-like 21..215 CDD:302622 50/264 (19%)
PTPc 221..501 CDD:304379 95/405 (23%)
3-PAP 566..692 CDD:289355
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590769
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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