DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sbf and mtm1

DIOPT Version :9

Sequence 1:NP_477401.2 Gene:Sbf / 41427 FlyBaseID:FBgn0025802 Length:1993 Species:Drosophila melanogaster
Sequence 2:NP_001032773.2 Gene:mtm1 / 560881 ZFINID:ZDB-GENE-051113-128 Length:639 Species:Danio rerio


Alignment Length:760 Identity:180/760 - (23%)
Similarity:285/760 - (37%) Gaps:283/760 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   929 LLPGEDLVTDHLRCFLMPDGREDETQCLIPAEGALFLTNYRVIFKGSPCDPLFCEQVIVRTFPIA 993
            |||||:.|.|....::.|..        ...:|.:|:||||:.||.:.     .|..:....|:.
Zfish    70 LLPGEERVIDKDIIYICPYN--------AAVKGKVFITNYRLYFKNTD-----SETPVTLNIPLG 121

  Fly   994 SLLKEKKISVLYLAHLDQTLTEGLQLRSSSFQLIKVAFDPEVTPEQIESFRKILSKARHP-FDEF 1057
            .:.:.:|:.             |...|..:      ::..|:|.:.:.:.|..|.:..|. .|.|
Zfish   122 VISRVEKMG-------------GASSRGEN------SYGLEITCKDMRNLRFALKQEGHSRRDIF 167

  Fly  1058 EY---FAFQ-SYGTMLQGVAPLKTKEKYSTLKGFAKKTLLRGAKKAGFKQKQQTKRKLVSDYDYG 1118
            |.   :||. |:|..|   ....::|||.                                    
Zfish   168 EIIFKYAFPLSHGMQL---FAFLSQEKYE------------------------------------ 193

  Fly  1119 SADAQETQSIDDELEDGDEFETQNNAMPRLLTTKDVERMRERSYVQDWKRLGFDAESQRGFRISN 1183
                :...::.:.||     |.:...:|.                .:|             |::.
Zfish   194 ----ENGWNVYEALE-----EYRRQGLPN----------------NEW-------------RVTF 220

  Fly  1184 ANTSYATCRSYPAIIVAPVQCSDAAIMHL----GRCFKGQRIPLPTWRH-ANGALLIRGGQPNSK 1243
            .|.:|..|.:||.|:|.|.:.::..:..:    .||    |||:.:|.| .|.|::.|..||   
Zfish   221 INKNYELCDTYPTILVVPYKATEDDLRKVATFRSRC----RIPVMSWFHKENHAVITRCSQP--- 278

  Fly  1244 SVIGMLKNTTGSTTNAHHDVTHYPEQDKYFLALINTMPKLTPLALNQYSGMNLSMSSLMGHSSSD 1308
             ::||    :|...          :.|:.:|.||......|.|.:.                   
Zfish   279 -LVGM----SGKRN----------KDDERYLDLIREANGTTKLTIY------------------- 309

  Fly  1309 DRQPLTPELSRKHKNNLDISDGNKSSQGGKGGTMKGNPKNSLAHPFRKMRLYALGEKSQAKSNMN 1373
            |.:|           |:: :..||::.||..|                         ..|..|  
Zfish   310 DARP-----------NVN-AVANKATGGGYEG-------------------------DDAYQN-- 335

  Fly  1374 VDFCADFIPVDYPDIRQSRPAFKKLIRACMPSHNTNEADGQSFAKMVEQSDWLQQISSL------ 1432
                |:.:.:|..:|...|.:.|||.....|:              ||:|.||..:.|.      
Zfish   336 ----AELVFLDIHNIHVMRESLKKLKDIVYPN--------------VEESHWLSSLESTHWLEHI 382

  Fly  1433 -MQLSGA--VVDLIDLQESSVMLSLEDGSDVTAQLSSIAQLCLDPYYRSLDGFRVLVEKEWLAFG 1494
             :.||||  |.|.:. ..||||:...||.|.||||:|::.|.||.|||:|.||:||:||||::||
Zfish   383 KLVLSGAIQVADKVS-SGSSVMVHCSDGWDRTAQLTSLSMLMLDSYYRTLRGFQVLMEKEWISFG 446

  Fly  1495 HRFAHRSNLKPSHANTNIA---FAPTFLQFLDVVHQLQRQFPMAFEFNDFYLRFLAYHSVSCRFR 1556
            |:||.|.    .|.:.|.|   .:|.||||:|.|.|:.:|||.|||||:..|..:..|..||||.
Zfish   447 HKFASRI----GHGDKNHADQDRSPIFLQFIDCVWQMTKQFPTAFEFNERLLVVILDHLYSCRFG 507

  Fly  1557 TFLFDCELERSDSGIAAMEDKRGSLNAKHMFGAGGMATNGSDDECSVYPLDIRSQRAPAPLNRIG 1621
            |||::||..|..:                                     ::|::..        
Zfish   508 TFLYNCESVRDSN-------------------------------------NVRTKTV-------- 527

  Fly  1622 HSIFDYIERQHNKTPIFYNFLYSGDKSVTLRPQNNVAALDLWCYY 1666
             |::.||   ::.|.::.|..|:.:.|..|.|..::..|:||..|
Zfish   528 -SLWSYI---NSDTSLYINPFYTPESSRVLYPVASMRHLELWVTY 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SbfNP_477401.2 uDENN 1..91 CDD:214824
DENN 142..325 CDD:280329
dDENN 384..452 CDD:129037
SBF2 585..807 CDD:289132
PH-GRAM_MTMR5_MTMR13 933..1047 CDD:275396 20/113 (18%)
Myotub-related 1161..1565 CDD:284109 124/420 (30%)
C1 1791..1838 CDD:237996
PH_Sbf1_hMTMR5 1888..1993 CDD:269941
PH 1891..1992 CDD:278594
mtm1NP_001032773.2 PH-like 77..176 CDD:327399 25/130 (19%)
Myotub-related 199..517 CDD:310891 128/454 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590774
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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