DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sbf and mtmr7b

DIOPT Version :9

Sequence 1:NP_477401.2 Gene:Sbf / 41427 FlyBaseID:FBgn0025802 Length:1993 Species:Drosophila melanogaster
Sequence 2:XP_005168409.1 Gene:mtmr7b / 559198 ZFINID:ZDB-GENE-050913-66 Length:645 Species:Danio rerio


Alignment Length:684 Identity:152/684 - (22%)
Similarity:242/684 - (35%) Gaps:230/684 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  1155 ERMRERSYVQDWKRLGFDAESQRG------FRISNANTSYATCRSYPAIIVAPVQCSDAAIMHLG 1213
            :.:||::    |..:...||..|.      :.::.||..|..|.:||:.:..|...|.|.|:...
Zfish   119 KELREKA----WGFMDLKAEFNRMGIPSNLWHVTAANHEYRLCDTYPSELFVPKSASPAVIVGSA 179

  Fly  1214 RCFKGQRIPLPTWRHAN-GALLIRGGQPNSKSVIGMLKNTTGSTTNAHHDVTHYPEQDKYFLALI 1277
            :.....|:|:.::.|.: .|.:.|..||                                     
Zfish   180 KFRSRGRLPVLSYFHRDTSASICRSSQP------------------------------------- 207

  Fly  1278 NTMPKLTPLALNQYSGMNLSMSSLMGHS--SSDDRQPLTPELSRKHKNNLDISDGNKSSQGGKGG 1340
                                   |.|.|  ||||.|.|.                         .
Zfish   208 -----------------------LSGFSARSSDDEQMLQ-------------------------A 224

  Fly  1341 TMKGNPKNSLAHPF-RKMRLYALGEKSQAKSNMNVDFCAD----FIPVDYPDIRQSRPAFKKLIR 1400
            .||.||.:...:.. .:.:|.|:..::..|...|.|...:    ||.::  :|...|.:.:||| 
Zfish   225 IMKSNPVSEFMYVVDTRPKLNAMANRAAGKGYENEDHYTNIKLQFIGIE--NIHVMRNSQQKLI- 286

  Fly  1401 ACMPSHNTNEADGQSFAKM---VEQSDWLQQISSLMQLSGAVVDLIDLQESSVMLSLEDGSDVTA 1462
                  :..:....|.|..   :|.|.||:.|.:::.....:...:.....||::...||.|.||
Zfish   287 ------DVGDMAAPSMADFLWGLENSGWLKHIKAVLDAGVFIAKAVAEDGVSVLVHCSDGWDRTA 345

  Fly  1463 QLSSIAQLCLDPYYRSLDGFRVLVEKEWLAFGHRFAHRSNLKPSHANTN-IAFAPTFLQFLDVVH 1526
            |..|:|.:.||||||::.|..||:||:|::|||:|:||.    :|.:.: ...:|...|||:.|.
Zfish   346 QACSVASVLLDPYYRTIKGLMVLIEKDWVSFGHKFSHRY----AHLDGDPKEVSPVMDQFLECVW 406

  Fly  1527 QLQRQFPMAFEFNDFYLRFLAYHSVSCRFRTFLFDCELERSDSGIAAMEDKRGSLNAKHMFGAGG 1591
            ||.:|||.|||||:.:|..|.....||::..|:.:|:.||.|                       
Zfish   407 QLMQQFPCAFEFNERFLIQLHMLIYSCQYGNFIGNCQKERRD----------------------- 448

  Fly  1592 MATNGSDDECSVYPLDIRSQRAPAPLNRIGHSIFDYIERQHNKTPIFYNFLYSGDKSVT---LRP 1653
                                   ..|....||::.::.....:   :.|.||..|.|.|   |||
Zfish   449 -----------------------LKLQERTHSLWPHLWENRAE---YTNPLYRTDHSQTQGVLRP 487

  Fly  1654 QNNVAALDLW--CYYTNEE--LAQGAPYDLEVTTVDDEIDLSETKGKRMVITAGYDNMEKCNPSA 1714
            .........|  .|...|.  .:|.:|.|......::...|.|.      :||..:.        
Zfish   488 LTTAYCFKFWKGMYGRAERSLSSQQSPADCLNAVREESQQLEEE------LTAHQER-------- 538

  Fly  1715 YVCLLSEVKQAET--ERGHLPQKWLQVWNSLEVPQLEPVARNTSLGNIFVQTHQHKRSTLEIIMK 1777
                |:::|:.:|  ||             .::.:|...||..:..                  :
Zfish   539 ----LAQLKEKKTSGER-------------KKISRLSERARRPTPN------------------E 568

  Fly  1778 GRLAGYQDKYFHPHRFEKH--PYTTPTNCNHCTK 1809
            |.|...|| ||...|.|||  .:|.|.:....||
Zfish   569 GELDSPQD-YFSTPRGEKHTPSFTLPLDLAAQTK 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SbfNP_477401.2 uDENN 1..91 CDD:214824
DENN 142..325 CDD:280329
dDENN 384..452 CDD:129037
SBF2 585..807 CDD:289132
PH-GRAM_MTMR5_MTMR13 933..1047 CDD:275396
Myotub-related 1161..1565 CDD:284109 103/421 (24%)
C1 1791..1838 CDD:237996 8/21 (38%)
PH_Sbf1_hMTMR5 1888..1993 CDD:269941
PH 1891..1992 CDD:278594
mtmr7bXP_005168409.1 PH-like 1..102 CDD:302622
Myotub-related 108..445 CDD:284109 105/427 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590762
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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