DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sbf and mtmr1a

DIOPT Version :10

Sequence 1:NP_477401.2 Gene:Sbf / 41427 FlyBaseID:FBgn0025802 Length:1993 Species:Drosophila melanogaster
Sequence 2:XP_073762672.1 Gene:mtmr1a / 553750 ZFINID:ZDB-GENE-050522-518 Length:699 Species:Danio rerio


Alignment Length:805 Identity:184/805 - (22%)
Similarity:301/805 - (37%) Gaps:225/805 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   912 EAKRHPHVQKPKIQTPCLLPGEDLVTDHLRCFLMPDGREDETQCLIPAEGALFLTNYRVIFKGSP 976
            :.:.||...:..:..|......:|..:       |..|:|....|....|:              
Zfish     4 QQQHHPSGSESPVLPPVARKPRNLGVN-------PASRQDSVDSLDSPTGS-------------- 47

  Fly   977 CDPLFCEQVIVRTF--------PIASLLKEKKISVLYLAHLDQTLTEGLQLRSSSFQLIKVAFDP 1033
             ...:|:|:|..|.        |..|:.:|.||.    ..:|..:::....||.........||.
Zfish    48 -HVEWCKQLIAATISSQITSGVPSESIHRESKIG----KKIDTRVSKRPNFRSQDSGEDGCQFDS 107

  Fly  1034 --EVTPEQIESFRKILSKARHPFDEFEYFAFQSYGTMLQGVAPLKTKEKYSTLKGFAKKTLLRGA 1096
              |:.....:.||.:...|  |.||......::..|.::.|..:      ....|....||....
Zfish   108 DCELPSHTSQVFRDVRRPA--PMDEVPLVPGETIKTTVKDVMYI------CPFTGAVTGTLTITD 164

  Fly  1097 KKAGFKQKQQTKRKLVSDYDYGSADAQETQSIDD--ELEDGDEFETQNNAMPRLLTTKD------ 1153
            .|..|...:: ....:.|.:.|:....||.|:..  |...|.|...::...||....|:      
Zfish   165 YKLYFVSLER-DAPFILDVNLGAISRLETISVQSLGENTSGMEIVCKDMRSPRFAYKKEEQSKLE 228

  Fly  1154 -VERMRERSY---------------------------VQDWKRLGFDAESQRGFRISNANTSYAT 1190
             :|.:.:.::                           |.::||:|...||   :.||..|::|..
Zfish   229 ILETLTKYAFPLSNELSLFAFQYKEQFPEDGWKVYDPVAEYKRMGLPNES---WSISKINSNYEV 290

  Fly  1191 CRSYPAIIVAPVQCSDAAIMHLGRCFKGQRIPLPTWRH-ANGALLIRGGQPNSKSVIGMLKNTTG 1254
            |.:|||::|.|....:..|..:.......|||:.:|.| ...|.::|..||           ..|
Zfish   291 CDTYPALLVTPTSIKEDEIRRVASFRVKHRIPVLSWIHPETQATIVRCSQP-----------MVG 344

  Fly  1255 STTNAHHDVTHYPEQDKYFLALINTMPKLTPLALNQYSGMNLSMSSLMGHSSSDDRQPLTPELSR 1319
            .|.....:..||                               :.::|..:            ::
Zfish   345 PTDRRCKEDEHY-------------------------------LQTIMDAN------------AQ 366

  Fly  1320 KHKNNLDISDGNKSSQGGKGGTMKGNPKNSLAHPFRKMRLYALGEKSQAKSNMNVDFCADFIPVD 1384
            .||  |.|.|..:::......|..|..:|...:|                 ||.::|      ::
Zfish   367 SHK--LAIFDARQNTVAHNHKTKDGGYENENFYP-----------------NMELNF------LE 406

  Fly  1385 YPDIRQSRPAFKKLIRACMPSHNTNEADGQSFAKMVEQSDWLQQISSLMQLSGAV--VDLIDLQE 1447
            .|:|...|.:.:||.....|:     .:.|.:...::.:.||:.|..|  |:|||  .|.::..:
Zfish   407 IPNIHVMRESLRKLKEVVYPT-----IEEQRWHSAIDATHWLEYIRLL--LAGAVRIADKVESSK 464

  Fly  1448 SSVMLSLEDGSDVTAQLSSIAQLCLDPYYRSLDGFRVLVEKEWLAFGHRFAHR-SNLKPSHANTN 1511
            |||::...||.|.||||:|::.|.||.|||:|.||:||:||||::|||:||.| .:...:|||:.
Zfish   465 SSVVVHCSDGWDRTAQLTSLSMLMLDSYYRTLRGFQVLLEKEWISFGHKFAARIGHGDENHANSE 529

  Fly  1512 IAFAPTFLQFLDVVHQLQRQFPMAFEFNDFYLRFLAYHSVSCRFRTFLFDCELERSDSGIAAMED 1576
              .:|.|:||:|.|.|:.||||.|||||:.:|..:..:..||.|.|||::.|.||.:..:     
Zfish   530 --RSPLFVQFIDCVWQMMRQFPSAFEFNELFLITILDYLYSCLFGTFLYNSEQERVEKEV----- 587

  Fly  1577 KRGSLNAKHMFGAGGMATNGSDDECSVYPLDIRSQRAPAPLNRIGHSIFDYIERQHNKTPIFYNF 1641
                                                     ||...|::.||..|...   |.|.
Zfish   588 -----------------------------------------NRKTVSLWSYINSQSED---FTNP 608

  Fly  1642 LYSGDKSVTLRPQNNVAALDLWCYY 1666
            .|...::..|.|..::..|:||..|
Zfish   609 FYVDYENHVLYPLASLRHLELWVGY 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SbfNP_477401.2 uDENN 1..91 CDD:214824
DENN 142..325 CDD:460461
dDENN 384..452 CDD:129037
SBF2 584..807 CDD:463536
PH-GRAM_MTMR5_MTMR13 933..1047 CDD:275396 23/123 (19%)
PTP-MTMR5-like 1179..1531 CDD:350382 95/355 (27%)
C1_Sbf-like 1790..1840 CDD:410377
PH_Sbf1_hMTMR5 1888..1993 CDD:269941
mtmr1aXP_073762672.1 None
Blue background indicates that the domain is not in the aligned region.

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