DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sbf and mtmr3

DIOPT Version :10

Sequence 1:NP_477401.2 Gene:Sbf / 41427 FlyBaseID:FBgn0025802 Length:1993 Species:Drosophila melanogaster
Sequence 2:XP_021333893.2 Gene:mtmr3 / 393838 ZFINID:ZDB-GENE-091204-465 Length:1186 Species:Danio rerio


Alignment Length:873 Identity:214/873 - (24%)
Similarity:336/873 - (38%) Gaps:254/873 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   903 IESLEPVYLEAKRHPHVQKPKIQTPCLLPGEDLVTDHLRCFLMPDGREDETQCLIPAEGALF-LT 966
            :|.::...:..::.|.:::..:|.|                 .|:...:.|:.:..||.|:. ::
Zfish     9 LECIQANQIFPRKPPVLEEEDLQVP-----------------FPELHGEFTEYVGRAEDAVIAMS 56

  Fly   967 NYR--VIFKGSPCDPLFCEQVIVRTFPIASLLKEKKISVLYLAHLDQTLTEGLQLRSSSFQLIKV 1029
            :||  :.||.|..:...||..:    |: .|::..:...::..|          :.....::|:.
Zfish    57 SYRLHIKFKESVVNNCSCEVSV----PL-QLIECVECRDMFQLH----------ITCKDCKIIRC 106

  Fly  1030 AFDPEVTPEQIESFRKILSKARHP---FDEFEYFAFQSYGTMLQGVAPLKTKEKYSTLKGFAKKT 1091
            .|.   |.||.:.:.|.|:.|..|   .:|...|||.::      ...|.|.||.          
Zfish   107 QFS---TFEQCQEWLKRLTAAVRPPSRIEELFSFAFHAW------CVDLYTGEKE---------- 152

  Fly  1092 LLRGAKKAGFKQKQQTKRKLVSDYDYGSADAQETQSIDDELEDGDEFETQNNAMPRLLTTKDVER 1156
                                                     :.||.....::.|.|.  ..:|||
Zfish   153 -----------------------------------------QHGDLCRPGDHVMSRF--HNEVER 174

  Fly  1157 MRERSYVQDWKRLGFDAESQRGFRISNANTSYATCRSYPAIIVAPVQCSDAAIMHLGRCFKGQRI 1221
            |            |||  :|..:|:|..|..|..|.|||.:::.|...:|..:.::......:||
Zfish   175 M------------GFD--TQNAWRVSEINNKYKLCSSYPQLLLVPAWITDKELENVAAFRSWKRI 225

  Fly  1222 PLPTWRH-ANGALLIRGGQPNSKSVIGMLKNTTGSTTNAHHDVTHYPEQDKYFLALINTMPKLTP 1285
            |...:|| :.||::.|.|||         :.:.....||  |..|          |:.::.:   
Zfish   226 PAVVYRHQSTGAVIARCGQP---------EVSWWGWRNA--DDEH----------LVQSIAR--- 266

  Fly  1286 LALNQYSGMNLSMSSLMGHSSSDDRQPLTPELSRKHKNNLDISDGNKSSQGGKGGTMKGNPKNSL 1350
                   ...:..||..|.|:.        .|||::.|..|:||.:..|     .....:...:|
Zfish   267 -------ACAVDSSSCKGVSNG--------SLSREYTNGADLSDVDFES-----SMTNSSEVETL 311

  Fly  1351 AHPFRKM-----RLYALGEKSQAKSNMNVDFCADFIP------VDYPDIRQSRPAFKKLIRACMP 1404
            |...||:     |.||....::||.....  |.::.|      :...:|...|.:|:.|...|  
Zfish   312 AIQPRKLLILDARSYAAAVANRAKGGGCE--CPEYYPNCEVVFMGMANIHSIRKSFQSLRFLC-- 372

  Fly  1405 SHNTNEADGQSFAKMVEQSDWLQQISSLMQLSGAVVDLIDLQESSVMLSLEDGSDVTAQLSSIAQ 1469
               |...|..::...:|.:.|||.:|.|::.|..|.:.:|.....|::...||.|.|.|:.::|:
Zfish   373 ---TQMPDPANWLSALESTKWLQHLSLLLKASLLVSNAVDRDHRPVLVHCSDGWDRTPQIVALAK 434

  Fly  1470 LCLDPYYRSLDGFRVLVEKEWLAFGHRFAHRSNLKPSHANTNIAFAPTFLQFLDVVHQLQRQFPM 1534
            |.||||||:::||:||||.|||.|||:||.|.....:..:.| ...|.|||:||.|||||||||.
Zfish   435 LLLDPYYRTIEGFQVLVETEWLDFGHKFADRCGHGENAEDLN-ERCPVFLQWLDCVHQLQRQFPC 498

  Fly  1535 AFEFNDFYLRFLAYHSVSCRFRTFLFDCELERSDSGIAAMEDKRGSLNAKHMFGAGGMATNGSDD 1599
            :||||:.:|..|..|:.||.|.|||.:...||.|..|                         .:.
Zfish   499 SFEFNEAFLVKLVQHTYSCLFGTFLCNSGKEREDRRI-------------------------QER 538

  Fly  1600 ECSVYPLDIRSQRAPAPLNRIGHSIFDYIERQHNKTPIFYNFLYSGDKSVTLRPQNNVAALDLW- 1663
            .|||:.|...:.|:                        |.|.|||......|.|..:|..|.|| 
Zfish   539 TCSVWSLLRAANRS------------------------FGNMLYSSHSETVLHPVCHVRNLMLWT 579

  Fly  1664 CYY------TNEELAQGAPYDLEVTTVDDEIDLSETKGKRMVITAGYDNMEKCNPSAYVC----- 1717
            ..|      |.......|||.......:|     :..|:|.. |..:||:    |||  |     
Zfish   580 AVYLPSSSPTTPSDDSCAPYPAPGANPED-----QPLGRRPK-TRSFDNL----PSA--CEVGNP 632

  Fly  1718 LLSEVKQAETERGHLPQKWLQVWNSLEV 1745
            |.|..:.::..   |.:||.....|||:
Zfish   633 LTSNRRSSDPS---LNEKWQDHRRSLEL 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SbfNP_477401.2 uDENN 1..91 CDD:214824
DENN 142..325 CDD:460461
dDENN 384..452 CDD:129037
SBF2 584..807 CDD:463536
PH-GRAM_MTMR5_MTMR13 933..1047 CDD:275396 21/116 (18%)
PTP-MTMR5-like 1179..1531 CDD:350382 106/363 (29%)
C1_Sbf-like 1790..1840 CDD:410377
PH_Sbf1_hMTMR5 1888..1993 CDD:269941
mtmr3XP_021333893.2 None
Blue background indicates that the domain is not in the aligned region.

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