DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sbf and sbf2

DIOPT Version :9

Sequence 1:NP_477401.2 Gene:Sbf / 41427 FlyBaseID:FBgn0025802 Length:1993 Species:Drosophila melanogaster
Sequence 2:XP_009301876.1 Gene:sbf2 / 378456 ZFINID:ZDB-GENE-030911-10 Length:1898 Species:Danio rerio


Alignment Length:2087 Identity:850/2087 - (40%)
Similarity:1202/2087 - (57%) Gaps:287/2087 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSRLADYFVIVGYDSDKEKTASNVGGQPTCGKIVQRFPEKDWPDTPFIEGIEWFCQPLGWSLSYE 65
            |:||||||.:|||  |:||..|..|    ||||:||||:|||..|.|.:|:|.||||.||.||.|
Zfish     1 MARLADYFTVVGY--DQEKAGSGEG----CGKIIQRFPKKDWDGTAFPQGVEMFCQPGGWRLSRE 59

  Fly    66 KQEPKFFVSVLTDIDANKHYCACLSFHETVAITQ---TRSVDDEDETIGSSRLLGATPSSMDGIT 127
            ::.|.||..||||||:.:|:|:||:|.|.....|   |...|.|:|          .....:|:.
Zfish    60 RKPPTFFTVVLTDIDSERHFCSCLTFFEAEVNLQGSKTLEADGEEE----------EEEEENGLI 114

  Fly   128 TTSTPASITHHSVMYAPKCLVLISRLDCAETFKNCLGTIYTVYIENLAYGLETLIGNILGCIQVP 192
               .||.:      :|||.|:|:||||..|.|:.|||.||||||::|.:.||.|:.|:..|. ||
Zfish   115 ---QPAEV------FAPKSLILVSRLDYPEIFRGCLGLIYTVYIDSLNFPLEGLVANLFTCF-VP 169

  Fly   193 PAGGPQVRFSIGAGDKQSLQPPQSSSLPTTGSGVHFLFKQLGIKNVLILLCSVMTENKILFLSKC 257
            .|||.|..||:||||:|.:|.|.:.|||.:...:..||:||||:|||.|.|:|:||:|:||.|..
Zfish   170 LAGGSQKLFSLGAGDRQLIQTPLNDSLPVSSKSIALLFQQLGIQNVLSLFCAVLTEHKVLFHSSS 234

  Fly   258 YWHLTDSCRALVALMYPFRYTHVYIPILPAPLTEVLSTPTPFIMGIHSSLQTEITDLLDVIVVDL 322
            |..|.::||||..||:|.:|::.|||:||:.|.||||:|||||:|:||..|:||.:|||||:.||
Zfish   235 YQRLGEACRALETLMFPLKYSYPYIPVLPSRLLEVLSSPTPFIIGVHSMFQSEIQELLDVIIADL 299

  Fly   323 DGGLVTIPESLTPPVPILPSPLWEQTQDLLSMILFPNLAQADLAFPTLERPSAIAKTDAQ-IDKE 386
            |||.:.|||.:  .:..||.||...||..|.|:|.|:|..||.|||    |...|.::.: :|||
Zfish   300 DGGTIKIPECI--HLSQLPEPLLHNTQKALFMVLHPDLEGADNAFP----PPRSAPSNLKLLDKE 358

  Fly   387 LRAIFMRLFAQLLQGYRSCLTIIRIHPKPVITFHKAGFLGARDLIESEFLFRVLDSMFFTTFVNE 451
            :||:|:||||||.|||||||.:||||.:|||.||||.|||.|.|||::||.:|||.|.|..||:|
Zfish   359 VRAVFLRLFAQLFQGYRSCLQLIRIHSEPVIHFHKAAFLGQRGLIENDFLTKVLDGMAFAGFVSE 423

  Fly   452 RGPPWRSSDAWDELYSSMNELLKSEAQNRNLVGRTQRFKGYFNFTFPSYFQILTHIQELGRVLYE 516
            ||||:|:.|.:|||.:...:..|.|  :.|||...:|                  ::||...||:
Zfish   424 RGPPYRACDLFDELVALDVDCFKDE--DENLVKLQKR------------------LRELSEQLYK 468

  Fly   517 NEGTLAHISYAQKVLRPPEGAFQRIHQPAFPRISSEKVELIIQEGIRK-NGVPQRFHVTRNQHR- 579
            ||....|::: |||.||.||:..|:|...||.:..|:||.:||||:.| :..|..   ||.:.: 
Zfish   469 NENPNPHMAF-QKVPRPTEGSHLRVHVVPFPMLEEERVEELIQEGLAKQHSAPVS---TRPEKKC 529

  Fly   580 IIPMGPRLPEALDVRPNVQNSARRLEVLRICVSYIFENRITDARKLLPAVMRTLMHRDARLILCR 644
            ::|.||.:...:....:|.||||||||:|.|:.:||:|:..:..|.|||.:|.|..:.||..|..
Zfish   530 VVPAGPPVVSIMGKASSVFNSARRLEVVRTCIGFIFDNKTLETEKTLPAALRALKGKAARQCLTE 594

  Fly   645 EFFGYVHGNKAVLDHQQFELVVRFMNKALQKSSGIDEYTVAAALLPMSTIFCRKLSTGVVQFAYT 709
            |...:|..|:|:||||||:.:||.||.|||..|..:||||||||||::|.|.|||:.||.|||||
Zfish   595 ELSHHVQQNRAILDHQQFDHIVRMMNCALQDCSSSEEYTVAAALLPLTTAFYRKLAAGVDQFAYT 659

  Fly   710 EIQDHAIWKNLQFWESTFFQDVQGQIKALYLLHRRQ----NEHQKEANCVLDEVPLEEPTALEIT 770
            .||:|.||.|.||||:||:.:||.||:||||.....    ....||.:.:.......|.||:::.
Zfish   660 CIQEHPIWTNQQFWEATFYSEVQNQIRALYLTAPEDKPLITAKIKEPSRLSTAAGQSERTAMDLA 724

  Fly   771 AEQLRKSPNIEEEKKAELAKSEESTLYSQAIHFANRMVSLLIPLDVNVDAASKPKPAFRLE--EN 833
            |||||..|.:.:||:.||.||||||::|||||:|:.||.||:|||.:.:...:..||...|  .|
Zfish   725 AEQLRAWPGLSKEKQHELVKSEESTVFSQAIHYASLMVYLLVPLDTSKNKLLRSNPAADWESGSN 789

  Fly   834 QSVSNSIMGSHSLSEHSDEGFEENNALEIGVTVGKTISRFIDCVCTEGGVTSEHIRNLHDMVPGV 898
            ..::|||.||.:.|..::.|||::...::..:||:.||||||.||||.|||.:||::||.|:||:
Zfish   790 SILTNSIAGSVAESFDTESGFEDSETSDVANSVGRFISRFIDKVCTESGVTQDHIKSLHSMIPGI 854

  Fly   899 VHMHIESLEPVYLEAKRHPHVQKPKIQTPCLLPGEDLVTDHLRCFLMPDGREDETQCL------I 957
            |.|.:|:||.|:.|::|.|.:|||||..|.|||||:||::.||..|.|||||:.|..|      :
Zfish   855 VAMQMETLEVVHRESRRLPPIQKPKILRPALLPGEELVSEGLRVVLDPDGREEATGGLLGGPHIL 919

  Fly   958 PAEGALFLTNYRVIFKGSPCDPLFCEQVIVRTFPIASLLKEKKISVLYLAHLDQTLTEGLQLRSS 1022
            |||||||||.||::|||:|.|||..||.::|:||:::|.|||||::  ...|.|.:.|||||||:
Zfish   920 PAEGALFLTTYRIVFKGTPHDPLVGEQAVIRSFPVSTLTKEKKITI--QNQLQQNMQEGLQLRSA 982

  Fly  1023 SFQLIKVAFDPEVTPEQIESFRKILSKARHPFDEFEYFAFQSYGTMLQGVAPLKTKEKYSTLKGF 1087
            ||||||||||.||:.|.:|.|||.:.:.|:|...|..|||.:..|..|.:.| |.||:.:   ||
Zfish   983 SFQLIKVAFDEEVSSEMVEIFRKHVQRIRYPSSIFSTFAFAAGQTAPQLILP-KQKERNT---GF 1043

  Fly  1088 --AKKTLLRGAKKAG--FKQKQQTKRKLVSDYDYGSADAQETQSIDDELEDGDEFETQNNAMPRL 1148
              ..||:::||.|||  ...:|.|.:|       ....::.|...||::...|:.|..::...:.
Zfish  1044 RTLSKTIVKGAIKAGKITMGRQSTLKK-------NEKGSRMTWHEDDDISISDDGEPPSSNTLKA 1101

  Fly  1149 LTTKDVERMRERSYVQDWKRLG---FDAESQR-----GFRISNANTSYATCRSYPAIIVAPVQCS 1205
            .....:|::.||:..:|::|||   ..|.|.|     .||::..|..|:.|||||.::|.|....
Zfish  1102 SEKSTMEQLVERACFRDYQRLGLGTISANSTRLKSGEQFRVTAVNRLYSLCRSYPGLLVIPHTVQ 1166

  Fly  1206 DAAIMHLGRCFKGQRIPLPTWRH-ANGALLIRGGQPNSKSVIGMLKN-TTGSTTNAHHDVTHYPE 1268
            |:::..:.||::..|:|:..|:| ...|:|:|.|..:||||:|:.|: ...|......|.:...|
Zfish  1167 DSSLQKVSRCYRHNRLPVVCWKHPRTKAVLLRSGGFHSKSVVGLFKSQNPSSAAPTSSDTSSSLE 1231

  Fly  1269 QDKYFLALINTMPKLTPLALNQYSGMNLSMSSLMGHS-SSDDRQPLTPELSRKHKNNLDISDGNK 1332
            |:||..|:::::    |:.........|:..||:|.| :|:.|....|:::..|   ||||..|.
Zfish  1232 QEKYLQAILSSI----PIYFKPNGSNTLTNRSLIGLSPASERRASRIPKMAPVH---LDISFTNS 1289

  Fly  1333 SSQGGKG------------GTMKGNPKNS------------LAHPF------------------- 1354
            .::|..|            .:.||...|.            :.||.                   
Zfish  1290 FTRGVLGYRDKLFTHSNQKASAKGRIHNQGVWASLRSSSRFIQHPAVGDVGARLAGKDLAPPTGI 1354

  Fly  1355 ---------RKMRLYALGEKSQAKS-NMNVDFCADFIPVDYPDIRQSRPAFKKLIRACMPSHNTN 1409
                     .:..||..||||..:. .::.....:.:||::.|.||.:.:||||:|||.||..::
Zfish  1355 ENLQAQLLKHQAALYIFGEKSHFRGLKLDPALNCELVPVEFADTRQVKASFKKLLRACAPSAMSS 1419

  Fly  1410 EADGQSFAKMVEQSDWLQQISSLMQLSGAVVDLIDLQESSVMLSLEDGSDVTAQLSSIAQLCLDP 1474
            :.: .||.|.:|:|:|:.||..|:||:...|:|:| ..|||::|||:|.|:|.|:.|:.|:..||
Zfish  1420 DTE-DSFLKALEESEWMLQIHKLLQLAVVAVELLD-SGSSVLVSLEEGWDITTQVVSLTQVLSDP 1482

  Fly  1475 YYRSLDGFRVLVEKEWLAFGHRFAHRSNLKPSHANTNIAFAPTFLQFLDVVHQLQRQFPMAFEFN 1539
            :||:|:||:||:|||||:|||:|:.|.||.|:...:  .|.|.||||||.|||:..|:|:.||||
Zfish  1483 FYRTLEGFQVLLEKEWLSFGHKFSQRGNLNPNSQGS--GFTPIFLQFLDCVHQVHNQYPLEFEFN 1545

  Fly  1540 DFYLRFLAYHSVSCRFRTFLFDCELERSDSGIAAMEDKRGSLNAKHMFGAGGMATNGSDDECSVY 1604
            .:||:|||||.||.||:.||.|.:.||.:.| ...||| |...:|.                   
Zfish  1546 QYYLKFLAYHYVSNRFKNFLLDSDYERLEHG-TLFEDK-GEKQSKR------------------- 1589

  Fly  1605 PLDIRSQRAPAPLNRIGHSIFDYIERQHNKTPIFYNFLYS-GDKSVTLRPQNNVAALDLWCYYTN 1668
                            |..|::.|.|.|.|.|:|:|:||| .:....|:|..::..|..|.:||.
Zfish  1590 ----------------GICIWECINRMHRKGPLFFNYLYSPSETEPVLKPLISIPNLTTWEFYTG 1638

  Fly  1669 EELAQGAPYDLEVTTV-DDEIDLSET--KGKRMVITAGYDNMEKCNPSAYVCLLSEVKQAETERG 1730
            |.|:.|..||..:.|| ...::.|:|  ..||.::...|.::.:..|.|...||:::::.|.|:|
Zfish  1639 ETLSTGPSYDWCMLTVRSQSMEESDTIATTKRRIVWPCYSSVSRAQPDAISKLLADIEKLEGEQG 1703

  Fly  1731 HLPQKWLQVWNSLEVPQLEPVARNTSL-GNIFVQTHQHKRSTLEI---IMKGRLAGYQDKYFHPH 1791
            ...:.|   ..:|| ..::.:..:... ||:       ::.:|.|   :....|..||.:     
Zfish  1704 QHSEPW---HTTLE-KAIDGIQEDLKQEGNL-------RKQSLSISGLVPTSNLQAYQRR----- 1752

  Fly  1792 RFEKHPYTTPTNCNHCTKLLWGPVGYRCMDCGNSYHEKCTEHSMKNCTKYKAIDGAVGPPNVNMS 1856
                             .:|..|                              ||.:|..|   |
Zfish  1753 -----------------SMLHLP------------------------------DGGLGEDN---S 1767

  Fly  1857 QGDTASIASSAATTARTSSHHFYNQFSSNVAENRTHEGHLYKRGALLKGWKQRWFVLDSIKHQLR 1921
            ......:...|||        .||||:....:||:.||.|||||||||.||.||||||:.|||||
Zfish  1768 PAAVNGVHRRAAT--------LYNQFTPKNEDNRSFEGILYKRGALLKAWKARWFVLDTTKHQLR 1824

  Fly  1922 YYDTSEDTAPKGIIELAEVQSVTAAQPAQIGA-KGVDEKGFFDLKTSKRIYNFYAINANLAQEWI 1985
            ||:|.|||:.:|.|:||:|:||..|.|. ||| |.:.||.||||||:||:|||.|.:|..||.||
Zfish  1825 YYETDEDTSCRGFIDLADVESVLIAAPT-IGAPKHISEKAFFDLKTNKRVYNFCAADAPSAQLWI 1888

  Fly  1986 EKLQACL 1992
            :|:|:|:
Zfish  1889 DKIQSCI 1895

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SbfNP_477401.2 uDENN 1..91 CDD:214824 52/89 (58%)
DENN 142..325 CDD:280329 101/182 (55%)
dDENN 384..452 CDD:129037 46/67 (69%)
SBF2 585..807 CDD:289132 111/225 (49%)
PH-GRAM_MTMR5_MTMR13 933..1047 CDD:275396 68/119 (57%)
Myotub-related 1161..1565 CDD:284109 163/467 (35%)
C1 1791..1838 CDD:237996 2/46 (4%)
PH_Sbf1_hMTMR5 1888..1993 CDD:269941 67/106 (63%)
PH 1891..1992 CDD:278594 64/101 (63%)
sbf2XP_009301876.1 uDENN 1..85 CDD:214824 52/89 (58%)
DENN 121..302 CDD:214823 101/181 (56%)
dDENN 356..424 CDD:129037 46/67 (69%)
SBF2 535..761 CDD:289132 111/225 (49%)
PH-GRAM_MTMR13 889..1007 CDD:275416 68/119 (57%)
Myotub-related 1117..1571 CDD:284109 163/464 (35%)
PH_Sbf1_hMTMR5 1792..1896 CDD:269941 67/105 (64%)
PH 1796..1896 CDD:278594 65/101 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590757
Domainoid 1 1.000 270 1.000 Domainoid score I1787
eggNOG 1 0.900 - - E1_KOG1090
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41810
Inparanoid 1 1.050 1413 1.000 Inparanoid score I118
OMA 1 1.010 - - QHG45747
OrthoDB 1 1.010 - - D11535at33208
OrthoFinder 1 1.000 - - FOG0003022
OrthoInspector 1 1.000 - - otm24703
orthoMCL 1 0.900 - - OOG6_104786
Panther 1 1.100 - - O PTHR10807
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R8681
SonicParanoid 1 1.000 - - X2012
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

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