DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sbf and Mtmr10

DIOPT Version :10

Sequence 1:NP_477401.2 Gene:Sbf / 41427 FlyBaseID:FBgn0025802 Length:1993 Species:Drosophila melanogaster
Sequence 2:NP_001094316.1 Gene:Mtmr10 / 309255 RGDID:1305958 Length:771 Species:Rattus norvegicus


Alignment Length:672 Identity:152/672 - (22%)
Similarity:250/672 - (37%) Gaps:218/672 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   921 KPKIQ--TPCLLPGEDLVTD---HLRCFLMPDGREDETQCLIPAEGAL-FLT---------NYRV 970
            :|||:  .|.|||||.:|.:   ..:|......:.|....||.:...: |:|         :||.
  Rat    28 EPKIKKLEPVLLPGEIVVNEVNFVRKCIATDTSQYDLWGKLICSNFKISFITDDPMPLQKFHYRN 92

  Fly   971 IFKGSPCDPLFC-EQVIVRTFPIASLLKEKKISVLYLAHLDQTL----TEGLQLRSSSFQLIKVA 1030
            :..|....||.| ||::.    :....:::|:     ...:|.|    || |.:....|::::..
  Rat    93 LLLGEHDVPLTCIEQIVT----VNDHKRKQKV-----LGPNQKLKFNPTE-LIIYCKDFRIVRFR 147

  Fly  1031 FDPEVTPEQIESFRKILSKARHPFDEFEYFAFQSYGTMLQGVAPLKTKEKYSTLKGFAKKTLLRG 1095
            || |..||..:.....::....|.|....|||:..|            :||   ...|.|  :.|
  Rat   148 FD-ESGPESAKKVCLAIAHYSQPTDLQLLFAFEYVG------------KKY---HNSANK--VNG 194

  Fly  1096 AKKAGFKQKQQTKRKLVSDYDYGSADAQETQSIDDELEDGDEFETQNNAMPRLLTTKDVERMRER 1160
            ....|.......          ||..:|.|..          |||.:                  
  Rat   195 VSSGGGGVWSGA----------GSPSSQRTPL----------FETYS------------------ 221

  Fly  1161 SYVQDWKRLGFDAESQR----GFRISNANTSYATCRSYPAIIVAPVQCSDAAIMHLGRCFKGQRI 1221
                ||     |.|::|    |:|:.:.|..|......|...|.|...:|..:......|.|:|:
  Rat   222 ----DW-----DRETKRTGASGWRVCSINEGYMISTCLPEYFVVPSSLADQDLKIFSPSFVGRRM 277

  Fly  1222 PLPTWRHANGALLIRGGQPNSKSVIGMLKNTTGSTTNAHHDVTHYPEQDKYFLALINTMPKLTPL 1286
            |...|.|:||:.|:|         :.::|:..              :|.|....:.|.:.|    
  Rat   278 PCWCWSHSNGSALVR---------MALIKDVL--------------QQRKIDQRICNAITK---- 315

  Fly  1287 ALNQYSGMNLSMSSLMGHSSSDDRQPLTPELSRKHKNNLDISDGNKSSQGGKGGTMKGNPKNSLA 1351
                            .|          |:.|..:|::||.:                       
  Rat   316 ----------------SH----------PQRSDVYKSDLDKT----------------------- 331

  Fly  1352 HPFRKMRLYALGEKSQAKSNMNVDFCADFIPVDYPDIRQSRPAFKKLIRACM--PSHNTNEADGQ 1414
                                             .|:|::.:.||.||.:.|:  |...|.|    
  Rat   332 ---------------------------------LPNIQEIQAAFVKLKQLCVNEPFEETEE---- 359

  Fly  1415 SFAKMVEQSDWLQQISSLMQLSGAVVDLIDLQESSVMLSLEDGSDVTAQLSSIAQLCLDPYYRSL 1479
            .:...:|.:.||:.:.:.::.|..:|.:::.|..||:|..|:|.|::..::|:.|:.:|||:|::
  Rat   360 KWLSSLESTRWLEYVRAFLKHSAELVYILESQRLSVVLQEEEGRDLSCLVASLVQVMMDPYFRTI 424

  Fly  1480 DGFRVLVEKEWLAFGHRFAHRSNLKPSHANTNIAFAPTFLQFLDVVHQLQRQFPMAFEFNDFYLR 1544
            .||:.||:|||:..|:.|..|.|    |...:...:|.||.|||...||..|:|.||||::.||.
  Rat   425 TGFQSLVQKEWVMAGYPFLDRCN----HLKRSEKESPLFLLFLDTTWQLLEQYPAAFEFSETYLA 485

  Fly  1545 FLAYHSVSCRFRTFLFDCELER 1566
            .|...:....|.||||:...:|
  Rat   486 VLCDSTRISLFGTFLFNSPHQR 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SbfNP_477401.2 uDENN 1..91 CDD:214824
DENN 142..325 CDD:460461
dDENN 384..452 CDD:129037
SBF2 584..807 CDD:463536
PH-GRAM_MTMR5_MTMR13 933..1047 CDD:275396 28/131 (21%)
PTP-MTMR5-like 1179..1531 CDD:350382 76/353 (22%)
C1_Sbf-like 1790..1840 CDD:410377
PH_Sbf1_hMTMR5 1888..1993 CDD:269941
Mtmr10NP_001094316.1 PH-GRAM_MTMR10 21..193 CDD:270154 46/192 (24%)
PTP-MTMR10 275..468 CDD:350441 65/309 (21%)
3-PAP 570..701 CDD:463634
Blue background indicates that the domain is not in the aligned region.

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