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Protein Alignment Sbf and Mtmr6

DIOPT Version :9

Sequence 1:	NP_477401.2	Gene:	Sbf / 41427	FlyBaseID:	FBgn0025802	Length:	1993	Species:	Drosophila melanogaster
Sequence 2:	NP_001381640.1	Gene:	Mtmr6 / 305935	RGDID:	1305378	Length:	655	Species:	Rattus norvegicus

Alignment Length:	606	Identity:	137/606 - (22%)
Similarity:	238/606 - (39%)	Gaps:	164/606 - (27%)

- Green bases have known domain annotations that are detailed below.

  Fly  1153 DVERMRERSYVQDWKRLGFDAESQR------GFRISNANTSYATCRSYPAIIVAPVQCSDAAIMH 1211
            |.||:      ..|:.:...||.:|      .:::|:||..|..|.:||..:..|...|...|:.
  Rat   118 DTERL------NGWQLIDLAAEYERMGVPNANWQLSDANREYKVCETYPRELYVPRTASRPVIVG 176

  Fly  1212 LGRCFKGQRIPLPTW-RHANGALLIRGGQPNSKSVIGMLKNTTGSTTNAHHD------VTHYPEQ 1269
            ........|:|:.:: :....|.:.|..||.|           |.:.....|      ::.....
  Rat   177 SSNFRSKGRLPVLSYCQQGTEAAICRCSQPLS-----------GFSARCLEDEHLLQAISKANPG 230

  Fly  1270 DKYFLALINTMPKLTPLALNQYSGMNLSMSSLMGHSSSDDRQPLTPELSRKHKNNLDISDGNKSS 1334
            ::| :.:::|.||             |.|.|..  .:..|...:...:|.|..|:..|.:.::
  Rat   231 NRY-MYVVDTRPK-------------LRMQSWW--DTQKDIGRIIVRISSKIWNDEKIRESDE-- 277

  Fly  1335 QGGKGGTMKGNPKNSLAHPFRKMRLYALGEKSQAKSNMNVDFCAD----FIPVDYPDIRQSRPAF 1395
                                 |.||.|:..::..|...|.|..::    |:.::  :|...|.:.
  Rat   278 ---------------------KKRLNAMANRAAGKGYENEDNYSNIRFQFVGIE--NIHVMRSSL 319

  Fly  1396 KKLIRACMPSHNTNEADGQS---FAKMVEQSDWLQQISSLMQLSGAVVDLIDLQESSVMLSLEDG 1457
            :||:       ..|.:.|.|   |...:|.|.||:.|.:::..:..:...|.::.:||::...||
  Rat   320 QKLL-------EVNGSKGLSVNDFYSGLESSGWLRHIKAVLDAAIFLAKAIVVENASVLVHCSDG 377

  Fly  1458 SDVTAQLSSIAQLCLDPYYRSLDGFRVLVEKEWLAFGHRFAHRSNLKPSHANTN-IAFAPTFLQF 1521
            .|.|:|:.|:..|.||.|||::.||.||:||:|::|||:|:.|.    .|.:.: ...:|.|.||
  Rat   378 WDRTSQVCSLGSLLLDSYYRTMKGFMVLIEKDWISFGHKFSERC----GHLDGDPKEVSPVFTQF 438

  Fly  1522 LDVVHQLQRQFPMAFEFNDFYLRFLAYHSVSCRFRTFLFDCELERSD------------------ 1568
            |:.|..|..|||.|||||:.:|..:..|..||:|..||.:|:.||.:
  Rat   439 LECVWHLTEQFPQAFEFNEAFLLQIHEHIHSCQFGNFLGNCQKEREELRLKEKTYSLWPFLLADK 503

  Fly  1569 ------------SGIAAMEDKRGSLNAK------HMFGAGGMATNGSDDECSVYPL--------- 1606
                        ..:..:|....|.|.|      |.|            :.:::|.
  Rat   504 KKYLNPLYSSKSQRLTVLEPNTASFNFKFWRNMYHQF------------DRTLHPRQSVLNIIMN 556

  Fly  1607 ----------DIRSQRAPAPLNRIGHSIFDYIERQHNKTPIFYNFLYSGDKSV-----TLRP-QN 1655
                      |::...|.....:.|....|.:...|.::|.....|...::|:     |||. :.
  Rat   557 MNEQNKQLEEDVKDLEAKIKQCKSGILTKDLLHAVHPESPSLKTSLCLKEQSLLPVKDTLRAVEG 621

  Fly  1656 NVAALDLWCYYTNEELAQGAP 1676
            :..|.:.:|.|| ||.::..|
  Rat   622 SSPADNRYCDYT-EEFSKSEP 641

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.