DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sbf and mtmr6

DIOPT Version :10

Sequence 1:NP_477401.2 Gene:Sbf / 41427 FlyBaseID:FBgn0025802 Length:1993 Species:Drosophila melanogaster
Sequence 2:XP_002940601.3 Gene:mtmr6 / 100497758 XenbaseID:XB-GENE-994672 Length:622 Species:Xenopus tropicalis


Alignment Length:617 Identity:152/617 - (24%)
Similarity:234/617 - (37%) Gaps:155/617 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  1156 RMRERSYVQDWKRLGFDAESQR------GFRISNANTSYATCRSYPAIIVAPVQCSDAAIMHLGR 1214
            :.:|...|..|:.:....|.||      .:::|:.|..|..|.:||..:..|:..|...|:...:
 Frog   115 KQKESEGVLGWQHIDLKEEYQRMGVPNSYWQLSDVNRDYKVCDTYPRELYVPITASKPIIVGSSK 179

  Fly  1215 CFKGQRIPLPTWRH-ANGALLIRGGQPNSKSVIGMLKNTTGSTTNAHHDVTHYPEQDKYFLALIN 1278
            .....|.|:.::.| |..|.:.|..||.|......|                   :|::.|..|:
 Frog   180 FRSKGRFPVLSYYHQAKKAAICRCSQPLSGFSARCL-------------------EDEHMLQSIS 225

  Fly  1279 TMPKLTPLALNQYSGMNLSMSSLMGHSSSDDRQPLTPELSRKHKNNLDISDGNKSSQGGKGGTMK 1343
               |..|:....|              ..|.|..|....:|               ..|||    
 Frog   226 ---KANPVCRLMY--------------VMDTRPKLNAMANR---------------AAGKG---- 254

  Fly  1344 GNPKNSLAHPFRKMRLYALGEKSQAKSNMNVDFCADFIPVDYPDIRQSRPAFKKLIRACMPSHNT 1408
                            |   |.:...||:...|      |...:|...|.:.:||:..|    .|
 Frog   255 ----------------Y---ENADNYSNIKFQF------VGIENIHVMRSSLQKLLEVC----GT 290

  Fly  1409 NEADGQSFAKMVEQSDWLQQISSLMQLSGAVVDLIDLQESSVMLSLEDGSDVTAQLSSIAQLCLD 1473
            .......|...:|.|.||:.|.:::..|..:...|:.:.:||::...||.|.|:|:.|:..|.||
 Frog   291 KALTANDFYNGLENSGWLRHIKAVLDASVCLAKAINDENASVLVHCSDGWDRTSQVCSLGSLLLD 355

  Fly  1474 PYYRSLDGFRVLVEKEWLAFGHRFAHRSNLKPSHANTNIAFAPTFLQFLDVVHQLQRQFPMAFEF 1538
            .:||::.||.||:||||:||||:|:.|.....|.:.   ..||.|.|||:.|.||..|||.||||
 Frog   356 SFYRTIKGFMVLIEKEWIAFGHKFSDRCGQLDSDSK---EIAPVFTQFLECVWQLMEQFPRAFEF 417

  Fly  1539 NDFYLRFLAYHSVSCRFRTFLFDCELERSDSGIAAMEDKRGSLNAKHMFGAGGMATNGSDDECSV 1603
            |:.:|..:..|..||:|..||.:|:.||.:   ..:::|..||.| |:.|......|...|:.|:
 Frog   418 NEDFLLQIHEHVYSCQFGNFLGNCQKEREE---LRLKEKTHSLWA-HLLGEKSKYRNPVFDKNSL 478

  Fly  1604 YPLDIRSQRAPAPLNRIGHSIFDYIERQHNKTPIFYNFLYSGDKSVTLRPQNNVAALDLWCYYTN 1668
            ..|.....      |.| |..|.:...      :::.|      .:.:.|:.:|.:|.|      
 Frog   479 RTLPFLEP------NTI-HFSFKFWRN------MYHQF------DLNMHPRQSVPSLLL------ 518

  Fly  1669 EELAQGAPYDLEVTTVDD----EIDLSETKGKRMVITAGYDNMEKCNPSAYVCLLSEVKQAETER 1729
                         .|:|:    |.:|.:.|.|       ..|:.|...|.....|.....|..||
 Frog   519 -------------KTIDESKCLEEELKQLKIK-------IRNLTKGEGSGSTDSLRSTPPASPER 563

  Fly  1730 GHLP--QKWLQVWNSLEVPQLEPVARNTSLGN 1759
            ...|  :|      .||:|.:....|.....|
 Frog   564 KQSPCFEK------ELEMPPVSDAIRTAEGSN 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SbfNP_477401.2 uDENN 1..91 CDD:214824
DENN 142..325 CDD:460461
dDENN 384..452 CDD:129037
SBF2 584..807 CDD:463536
PH-GRAM_MTMR5_MTMR13 933..1047 CDD:275396
PTP-MTMR5-like 1179..1531 CDD:350382 89/352 (25%)
C1_Sbf-like 1790..1840 CDD:410377
PH_Sbf1_hMTMR5 1888..1993 CDD:269941
mtmr6XP_002940601.3 PH-GRAM_MTMR6 1..101 CDD:270151
PTP_DSP_cys 130..431 CDD:475123 102/387 (26%)
Blue background indicates that the domain is not in the aligned region.

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