DRSC/TRiP Functional Genomics Resources

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Protein Alignment HisCl1 and glra4a

DIOPT Version :9

Sequence 1:NP_731632.1 Gene:HisCl1 / 41426 FlyBaseID:FBgn0037950 Length:426 Species:Drosophila melanogaster
Sequence 2:XP_005169655.1 Gene:glra4a / 83413 ZFINID:ZDB-GENE-010410-3 Length:457 Species:Danio rerio


Alignment Length:391 Identity:150/391 - (38%)
Similarity:213/391 - (54%) Gaps:35/391 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 YDKNRAPKLLGQPTVVYFHVTVLSLDSINEESMTYVTDIFLAQSWRDPRLRLPENMSEQYRILDV 131
            ||....|...|.|..|..::.:.|..||.|.:|.|..::||.|.|.||||...|.....   ||:
Zfish    58 YDARIRPNFKGPPVNVTCNIFINSFGSITETTMDYRLNVFLRQQWNDPRLAYSEYPDAS---LDL 119

  Fly   132 D--WLHSIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQ 194
            |  .|.|||:||.||.|.|...|||::..|..|.::.:..:||..:|||:|||.|..:::|.|.|
Zfish   120 DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQNGNVLYSIRLTLILSCPMDLKNFPMDIQ 184

  Fly   195 ICSMMIESLSHTVEDLVFIWNMTDPLVVNTEIELPQLDISNNYTTD-CTIEYSTGNFTCLAIVFN 258
            .|:|.:||..:|:.||:|.|...:|:.|..::.|||..:....... ||..|:||.|||:.:.|:
Zfish   185 TCTMQLESFGYTMNDLIFEWLSDNPVQVADDLTLPQFVLKEEKDLGYCTKHYNTGKFTCIEVKFH 249

  Fly   259 LRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYV 323
            |.|::||:|...||||.|||::||:||||..:|.||||.||:|::||:.||::.|:.|||.||||
Zfish   250 LERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYV 314

  Fly   324 KAIDVWMSSCSVFVFLSLMEFAVVN-------NFMGPVATKAMKGYSDENISDLD-------DLK 374
            ||||:||:.|.:|||.:|:|:|.||       .|:.....:..:...:|.:.:..       .|.
Zfish   315 KAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKEFIRLRKKQRRQRIEEELVRESRGFYFRGYGLG 379

  Fly   375 SALQHHRESIIE--------PQYDTFCHGHAT-------AIYIDKFSRFFFPFSFFILNIVYWTT 424
            ..||....:.:|        |.......|.|.       |..||..||..||.||.|.|:.||.|
Zfish   380 HCLQTKDGTAVEGSSVFAPPPPVQVLYDGEAVRKRFVDRAKRIDTISRAVFPLSFLIFNVFYWIT 444

  Fly   425 F 425
            :
Zfish   445 Y 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HisCl1NP_731632.1 Neur_chan_LBD 67..262 CDD:280998 75/197 (38%)
Neur_chan_memb 270..>350 CDD:280999 48/86 (56%)
glra4aXP_005169655.1 LIC 27..445 CDD:273305 149/389 (38%)
Neur_chan_LBD 48..254 CDD:280998 76/198 (38%)
Neur_chan_memb 261..442 CDD:280999 68/180 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45222
OrthoDB 1 1.010 - - D276914at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18945
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.930

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