DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HisCl1 and GABRQ

DIOPT Version :9

Sequence 1:NP_731632.1 Gene:HisCl1 / 41426 FlyBaseID:FBgn0037950 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_061028.3 Gene:GABRQ / 55879 HGNCID:14454 Length:632 Species:Homo sapiens


Alignment Length:606 Identity:131/606 - (21%)
Similarity:216/606 - (35%) Gaps:243/606 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 HYESSLSLPD-------------------ILPIPSKTYDKNRAPKLLGQPTVVYFHVTVLSLDSI 94
            |:|.|.::|:                   ||......||....|...|.|..|...:.|.|::.|
Human    33 HFEFSSAVPEVVLNLFNCKNCANEAVVQKILDRVLSRYDVRLRPNFGGAPVPVRISIYVTSIEQI 97

  Fly    95 NEESMTYVTDIFLAQSWRDPRLRLPE---NMSEQYRILDVDWLHSIWRPDCFFKNAKKVTFHEMS 156
            :|.:|.|...:|..|:|:|.||...|   |::..||:.:     .:|.|||:|.|:|....|:::
Human    98 SEMNMDYTITMFFHQTWKDSRLAYYETTLNLTLDYRMHE-----KLWVPDCYFLNSKDAFVHDVT 157

  Fly   157 IPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTVEDLVFIW------- 214
            :.|....|:.|.|:.|..:||...:|::....:|.|.|.|::::||..:||||::..|       
Human   158 VENRVFQLHPDGTVRYGIRLTTTAACSLDLHKFPMDKQACNLVVESYGYTVEDIILFWDDNGNAI 222

  Fly   215 NMTDPLVVNTEIELPQLDISNNYTTDCTIEYSTGNFTCLAIVFNLRRRLGYHLFHTYIPSALIVV 279
            :||:      |:.:||........|...:.:.||::..|.:.|.::|.:..:|...|.|:.|..:
Human   223 HMTE------ELHIPQFTFLGRTITSKEVYFYTGSYIRLILKFQVQREVNSYLVQVYWPTVLTTI 281

  Fly   280 MSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDVWMSSCSVFVFLSLMEF 344
            .||||||:..::..||||:|:||:|.|.|.::..:..||.:|.:||||:::..|..||||||:|:
Human   282 TSWISFWMNYDSSAARVTIGLTSMLILTTIDSHLRDKLPNISCIKAIDIYILVCLFFVFLSLLEY 346

  Fly   345 AVVNNF----------------------------------------------------MGPVATK 357
            ..:|..                                                    ..|:|:.
Human   347 VYINYLFYSRGPRRQPRRHRRPRRVIARYRYQQVVVGNVQDGLINVEDGVSSLPITPAQAPLASP 411

  Fly   358 AMKG-----------------------------YSDENISDL--------------------DDL 373
            ...|                             .:.|::|||                    ||.
Human   412 ESLGSLTSTSEQAQLATSESLSPLTSLSGQAPLATGESLSDLPSTSEQARHSYGVRFNGFQADDS 476

  Fly   374 ----------------------------------------KSALQHHRESIIEPQYD-------- 390
                                                    |..|.|..:.:.|..:|        
Human   477 IIPTEIRNRVEAHGHGVTHDHEDSNESLSSDERHGHGPSGKPMLHHGEKGVQEAGWDLDDNNDKS 541

  Fly   391 -----------------------------------------------TFCHGHATAIY------- 401
                                                           :|..|.:..::       
Human   542 DCLAIKEQFKCDTNSTWGLNDDELMAHGQEKDSSSESEDSCPPSPGCSFTEGFSFDLFNPDYVPK 606

  Fly   402 IDKFSRFFFPFSFFILNIVYW 422
            :||:|||.||.:|.:.|||||
Human   607 VDKWSRFLFPLAFGLFNIVYW 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HisCl1NP_731632.1 Neur_chan_LBD 67..262 CDD:280998 59/204 (29%)
Neur_chan_memb 270..>350 CDD:280999 35/79 (44%)
GABRQNP_061028.3 Neur_chan_LBD 60..>353 CDD:332142 98/303 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 410..458 5/47 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 491..523 2/31 (6%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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