DRSC/TRiP Functional Genomics Resources

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Protein Alignment HisCl1 and NtR

DIOPT Version :9

Sequence 1:NP_731632.1 Gene:HisCl1 / 41426 FlyBaseID:FBgn0037950 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_651958.2 Gene:NtR / 43935 FlyBaseID:FBgn0029147 Length:585 Species:Drosophila melanogaster


Alignment Length:317 Identity:60/317 - (18%)
Similarity:117/317 - (36%) Gaps:77/317 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 RNNTESAELVSHYE---SSLSLPDILPIPSKTYDKNRAPKLLGQPTVVYFHVTVLSLDSINEESM 99
            :..|::.:|:||..   .:.|:|..|                   :.:.||....|| :..:.|.
  Fly   211 KEETKTEKLLSHLNIQAENASMPANL-------------------SSISFHFQTRSL-AYEQTSS 255

  Fly   100 TYVTDIFLAQSWRDPRL-RLPENMS--EQYRILDVDWLHSIWRPDCFFKNAKKVTFHEMSIPNHY 161
            ...|.:.:...|||.|| ..||:..  |.:...|:    .||:|.....|....:..:: :.::.
  Fly   256 LLQTRMHMMMHWRDSRLVWKPEDFGSLESFEHPDL----RIWKPHMNVLNGALQSMGQV-LQSYE 315

  Fly   162 LWLYHDKTL-LYMSKLTLVLSCAMKFESYPHDTQICSMMIE-SLSHTVEDLVFIW-NMTDPLVVN 223
            |.:|.:.:: ||...|.|...|.....::|.:...|.:.:. :.....|::..|: :...|:..|
  Fly   316 LMVYANGSITLYAQNLQLASWCVDSARNWPSERVTCDIELGLNGQEGQENVALIYDDQRKPIAPN 380

  Fly   224 TEIELP-------------QLDISNNYTTDCTIEYSTGNFTCLAIVFNLRRRLGYHLFHTYIP-- 273
            ..:..|             :.|....|.....::..||:   :||.|.|:|...:::...|:|  
  Fly   381 EHVNTPSGWSFTQMSVVLVENDSQRRYNPKGMMQKMTGD---VAIEFTLQRNRSFYMTVFYLPLI 442

  Fly   274 -----------------SALIVVMSWISFW--------IKPEAIPARVTLGVTSLLT 305
                             |:||::...|:.|        ..|..:|..:|.....::|
  Fly   443 ACQMFLILSFVLRSTRRSSLILIALLIAAWGLMYMTRYASPHYVPPMMTAYKVIMMT 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HisCl1NP_731632.1 Neur_chan_LBD 67..262 CDD:280998 41/213 (19%)
Neur_chan_memb 270..>350 CDD:280999 11/63 (17%)
NtRNP_651958.2 Methyltransf_FA 90..191 CDD:289052
Neur_chan_LBD 212..429 CDD:280998 48/244 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18945
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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