DRSC/TRiP Functional Genomics Resources

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Protein Alignment HisCl1 and GluClalpha

DIOPT Version :9

Sequence 1:NP_731632.1 Gene:HisCl1 / 41426 FlyBaseID:FBgn0037950 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_001287408.1 Gene:GluClalpha / 42350 FlyBaseID:FBgn0024963 Length:463 Species:Drosophila melanogaster


Alignment Length:440 Identity:139/440 - (31%)
Similarity:215/440 - (48%) Gaps:67/440 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 SLSLPDILPIPSKTYDKNRAPKLLGQ-----------------PTVVYFHVTVLSLDSINEESMT 100
            |.||.:...|..:..:|....::||.                 |.||..::.|.|:..|::.:|.
  Fly    18 SASLANNAKINFREKEKKVLDQILGAGKYDARIRPSGINGTDGPAVVRVNIFVRSISKIDDVTME 82

  Fly   101 YVTDIFLAQSWRDPRLRLPENMSEQYRILDVDWLHSIWRPDCFFKNAKKVTFHEMSIPNHYLWLY 165
            |...:...:.|.|.||:. :::..:.:.|.:...:.:|.||.||.|.|:..||.:.:||.|:.::
  Fly    83 YSVQLTFREQWTDERLKF-DDIQGRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIF 146

  Fly   166 HDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTVEDLVFIWNMTDPLVVNTEIELPQ 230
            .:.::||..:::|.|:|.|..:.||.|.||||:.:.|...|..||||:|...||:.|...:.||:
  Fly   147 PNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPR 211

  Fly   231 LDISNNYTTDCTIEYSTGNFTCLAIVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPAR 295
            ..:....|..|..:.:||.::||.:....:|...|:|...|||..::|::||:|||:...|:|||
  Fly   212 FTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPAR 276

  Fly   296 VTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDVWMSSCSVFVFLSLMEFAVVNNFMGPVATKA-- 358
            |:||||:|||:|||.:....|||||||.||||||...|..|||.:|:|||:||......:.||  
  Fly   277 VSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSGSNKANM 341

  Fly   359 -----------MKGYSDENISDLDDLKS------------------ALQHHRESIIEPQYDTFCH 394
                       ::..|.:..|||.|..|                  .|..|....:..:....|.
  Fly   342 HKENMKKKRRDLEQASLDAASDLLDTDSNATFAMASQFARGGGQQKPLVRHPGDPLALEKRLQCE 406

  Fly   395 GHATA--------IYIDKF----------SRFFFPFSFFILNIVYWTTFL 426
            .|..|        .::.||          ||..||..|.:.|:|||:|:|
  Fly   407 VHMQAPKRPNCCKTWLSKFPTRSKRIDVISRITFPLVFALFNLVYWSTYL 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HisCl1NP_731632.1 Neur_chan_LBD 67..262 CDD:280998 59/211 (28%)
Neur_chan_memb 270..>350 CDD:280999 47/79 (59%)
GluClalphaNP_001287408.1 LIC 3..455 CDD:273305 137/437 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D276914at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18945
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.020

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