Sequence 1: | NP_731632.1 | Gene: | HisCl1 / 41426 | FlyBaseID: | FBgn0037950 | Length: | 426 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001097669.2 | Gene: | nAChRalpha4 / 40521 | FlyBaseID: | FBgn0266347 | Length: | 539 | Species: | Drosophila melanogaster |
Alignment Length: | 363 | Identity: | 85/363 - (23%) |
---|---|---|---|
Similarity: | 139/363 - (38%) | Gaps: | 80/363 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 34 VHG-YRNNTESAELVSHYESSLSLPDILPIPSKTYDKNRAPKLLGQPTV-------VYFHVTVLS 90
Fly 91 LDSINEESMTYVTDIFLAQSWRDPRLRLPENMSEQYRILDVDWLHSIWRPDCFFKN--------- 146
Fly 147 -AKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIES-------- 202
Fly 203 -LSHTVE----DLVFIWNMTDPLVVNTE---IELPQLDISNNYTTDCTIEYSTGNFTCLAIVFN- 258
Fly 259 -LRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVS- 321
Fly 322 YVKAIDVWMSSCSVFVFLSLMEFAVVNN--FMGPVATK 357 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
HisCl1 | NP_731632.1 | Neur_chan_LBD | 67..262 | CDD:280998 | 54/229 (24%) |
Neur_chan_memb | 270..>350 | CDD:280999 | 19/82 (23%) | ||
nAChRalpha4 | NP_001097669.2 | LIC | 1..505 | CDD:273305 | 85/363 (23%) |
Neur_chan_LBD | 12..227 | CDD:280998 | 59/254 (23%) | ||
Neur_chan_memb | 234..505 | CDD:280999 | 22/91 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |