DRSC/TRiP Functional Genomics Resources

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Protein Alignment HisCl1 and pHCl-1

DIOPT Version :9

Sequence 1:NP_731632.1 Gene:HisCl1 / 41426 FlyBaseID:FBgn0037950 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_001261898.1 Gene:pHCl-1 / 39730 FlyBaseID:FBgn0264908 Length:978 Species:Drosophila melanogaster


Alignment Length:348 Identity:105/348 - (30%)
Similarity:162/348 - (46%) Gaps:45/348 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 HCVHGYRNNTESAELVSHYESSLSLPDILP--IPSKTYDKNRAPKL--------LGQPTV----- 81
            |.:||..        .|.::.|.|..:||.  :..|.|||...|.:        |..|.:     
  Fly   321 HPIHGID--------WSKFDESSSDKEILDLLLEKKRYDKRLLPPVNDEDFCCGLQSPDMATNQN 377

  Fly    82 -----------VYFHVTVLSLDSINEESMTYVTDIFLAQSWRDPRLRLPENMSEQYRILDVDWLH 135
                       |..:|.:|||.|.:|.|:.|..:..|.|.|.||||:.  .....|..|:.  ||
  Fly   378 ARRPHNRGTLTVNVNVLLLSLASPDESSLKYEVEFLLNQQWNDPRLQY--GNKSHYDFLNA--LH 438

  Fly   136 ---SIWRPDCFFKNAKKVTFHEMSIPNHY-LWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQIC 196
               |||.||.:|  .....|.:..||.|: |.::.:.|:.|..:..|:|||......:|.|...|
  Fly   439 HHDSIWTPDTYF--IMHGDFKDPIIPMHFALRIFRNGTITYAMRRHLILSCQGSLHIFPFDDPKC 501

  Fly   197 SMMIESLSHTVEDLVFIW-NMTDPLVVNTEIELPQLDISNNYTTDCTIEYSTGNFTCLAIVFNLR 260
            |..:||:|:....:.::| |..|.|..:..:......:..|.||.|......||::||.:.....
  Fly   502 SFSMESISYEEAQIKYVWKNDEDTLRKSPSLTTLNAYLIKNQTTACDQNSWRGNYSCLQVELTFT 566

  Fly   261 RRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKA 325
            |...|:....:||..::|..|:|:||::..|:||||.:|||::|...|.:...:.:||.||.:.|
  Fly   567 RDRAYYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFTTSNGFRSTLPVVSNLTA 631

  Fly   326 IDVWMSSCSVFVFLSLMEFAVVN 348
            ::||...|..|::.||:||..||
  Fly   632 MNVWDGVCMCFIYASLLEFVCVN 654

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HisCl1NP_731632.1 Neur_chan_LBD 67..262 CDD:280998 62/223 (28%)
Neur_chan_memb 270..>350 CDD:280999 32/79 (41%)
pHCl-1NP_001261898.1 Neur_chan_LBD 338..566 CDD:280998 65/233 (28%)
Neur_chan_memb 578..>682 CDD:280999 32/77 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D614790at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18945
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.020

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