Protein Alignment HisCl1 and Rdl

DIOPT Version :9

• Sequence 1: NP_731632.1
• Gene: HisCl1 / 41426
• FlyBaseID: FBgn0037950
• Length: 426
• Species: Drosophila melanogaster
• Sequence 2: NP_001261617.1
• Gene: Rdl / 39054
• FlyBaseID: FBgn0004244
• Length: 608
• Species: Drosophila melanogaster
• Alignment Length: 336
• Identity: 117/336 - (34%)
• Similarity: 186/336 - (55%)
• Gaps: 10/336 - (2%)

  Fly    15 IALAIYLHALEQSIQHCHCVHGYRNNTESAELVSHYESSLSLPDILPIPSKTYDKNRAPKLLGQP 79
            |.|||.:..:.|...|.. :|..:..|....::    ..:::..||...|.:|||...|...|.|
  Fly    23 IWLAINMALIAQETGHKR-IHTVQAATGGGSML----GDVNISAILDSFSVSYDKRVRPNYGGPP 82

  Fly    80 TVVYFHVTVLSLDSINEESMTYVTDIFLAQSWRDPRLRLPENMSEQYRILDVDWLHSIWRPDCFF 144
            ..|...:.|||:.|::|..|.:..|.:..|.|.||||...:....:...:..:::.:||.||.||
  Fly    83 VEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFF 147

  Fly   145 KNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTVED 209
            .|.|:..||..:..|.::.::|..::....:||:..||.|..:.:|.|.|:|.:.|||..:|:.|
  Fly   148 VNEKQSYFHIATTSNEFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRD 212

  Fly   210 LVFIWNMTDPLV---VNTEIELPQLDISNNYTTDCTIEYSTGNFTCLAIVFNLRRRLGYHLFHTY 271
            :.:.|.  |.|.   :::|:||||..:..:......|..:|||::.||......|.:||:|...|
  Fly   213 IRYFWR--DGLSSVGMSSEVELPQFRVLGHRQRATEINLTTGNYSRLACEIQFVRSMGYYLIQIY 275

  Fly   272 IPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDVWMSSCSVF 336
            |||.|||::||:|||:...|.||||.||||::||:.|..:.:..:||.:||||:|||::.:|.|.
  Fly   276 IPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVM 340

  Fly   337 VFLSLMEFAVV 347
            ||.||:|:|.|
  Fly   341 VFASLLEYATV 351

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HisCl1	NP_731632.1	Neur_chan_LBD	67..262	CDD:280998	60/197 (30%)
		Neur_chan_memb	270..>350	CDD:280999	42/78 (54%)
Rdl	NP_001261617.1	LGIC_ECD_GABAR_RDL-like	83..266	CDD:349809	54/184 (29%)
		Neur_chan_memb	274..588	CDD:397193	42/78 (54%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR18945
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.910