DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HisCl1 and CG12344

DIOPT Version :9

Sequence 1:NP_731632.1 Gene:HisCl1 / 41426 FlyBaseID:FBgn0037950 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_001286298.1 Gene:CG12344 / 36145 FlyBaseID:FBgn0033558 Length:449 Species:Drosophila melanogaster


Alignment Length:439 Identity:131/439 - (29%)
Similarity:219/439 - (49%) Gaps:69/439 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 TESAELVSHYESSLSLPDILPIPSKTYDKNRAPKLLGQPTVVYFHVTVLSLDSINEESMTYVTDI 105
            :|:.|...:|.:.   |.:: :|.....:.|.|...|.|.:|.|.:.|:.::|||.|.|.:..|:
  Fly    23 SEATEAHMNYTAK---PRVV-LPPNYVKEIRPPSKKGSPVIVDFSIFVVDINSINVEDMDFRVDM 83

  Fly   106 FLAQSWRDPRLRLPENMSEQ---YRILDVDWLHSIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHD 167
            |:.|.|.:.||.:|:::.|:   |..|..:...:.|:||.:|.|:|......::.....:.||.:
  Fly    84 FIHQRWLESRLEIPDDIFEEGDDYVTLLPEVFENFWQPDPYFLNSKIAEIATLTHKFTSVTLYKN 148

  Fly   168 KTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTVEDLVFIWNMTDPLVVNTEIELPQ-- 230
            ||:.|.:::..:::|.|:|:.||.|.|:|.:.|||.|...:.:...|: ...:.:|.|::|.|  
  Fly   149 KTVRYAARMHAIIACQMEFQLYPMDIQVCPIYIESFSSNNQKVKLRWS-DSGVTLNPELKLLQYN 212

  Fly   231 ------LDISNNYTTDCTIEYSTGNFTCLAIVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKP 289
                  |:.|:.|..:     ..|||:.|.:.|...|::|:||..|:.||:|:|::||.|||:..
  Fly   213 LGQPLELEESDGYMPE-----KVGNFSRLTVYFRFERQIGHHLIQTFAPSSLVVMLSWFSFWLGL 272

  Fly   290 EAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDVWMSSCSVFVFLSLMEFAVV------- 347
            :|||.||||.||.:|||.|..|.:  .:|||:||||:|:||:.|.:.||.:|.||.||       
  Fly   273 DAIPGRVTLLVTCMLTLVTMFTGA--DIPPVAYVKALDLWMAGCMLSVFAALAEFVVVKVLDVQY 335

  Fly   348 ----------------NNFMGPVAT---------KAMKGYSDENISDLDDLKSALQHH------- 380
                            |...|..||         ::.|.........    :::||.:       
  Fly   336 QYQVNRIPKVLPMRISNMEKGQCATVASWEGGAVRSRKATQTPTTPG----QTSLQGNGGPPKPA 396

  Fly   381 -RESIIEPQYDTFCHGHATAIY--IDKFSRFFFPFSFFILNIVYWTTFL 426
             |:|::...:.....|....::  |||.||..||..||:..::||...|
  Fly   397 RRQSLLSVAWTDTDTGVEKIMWREIDKVSRAVFPILFFVFVLLYWPILL 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HisCl1NP_731632.1 Neur_chan_LBD 67..262 CDD:280998 58/205 (28%)
Neur_chan_memb 270..>350 CDD:280999 43/102 (42%)
CG12344NP_001286298.1 LIC 8..441 CDD:273305 128/433 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18945
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.