DRSC/TRiP Functional Genomics Resources

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Protein Alignment HisCl1 and Lcch3

DIOPT Version :9

Sequence 1:NP_731632.1 Gene:HisCl1 / 41426 FlyBaseID:FBgn0037950 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_996469.1 Gene:Lcch3 / 32554 FlyBaseID:FBgn0010240 Length:496 Species:Drosophila melanogaster


Alignment Length:499 Identity:157/499 - (31%)
Similarity:234/499 - (46%) Gaps:100/499 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 IALAIYLHALEQSIQHCHCVHGYRNNTESAELVSHYESSLSLPDILPIPSKTYDKNRAPKLLGQP 79
            ::..::...|...:|...|:   |.:..:..|.:   .:.::.:||    :.||....|...|:|
  Fly     9 VSCGLFFFLLGAQLQLIRCI---RKDVLAGRLEN---VTQTISNIL----QGYDIRLRPNFGGEP 63

  Fly    80 TVVYFHVTVLSLDSINEESMTYVTDIFLAQSWRDPRLRLPENMSEQY-------RILDV-----D 132
            ..|...:|:.|.|:|:|.:|.|...::|.|.|||.||..  |:..||       .|.||     |
  Fly    64 LHVGMDLTIASFDAISEVNMDYTITMYLNQYWRDERLAF--NIFGQYFDDENDDGISDVLTLSGD 126

  Fly   133 WLHSIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICS 197
            :...||.||.||.|.|....|:::..|..:.|..|..:.|..:.|..|:|.|....||.|:|.|:
  Fly   127 FAEKIWVPDTFFANDKNSFLHDVTERNKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCT 191

  Fly   198 MMIESLSHTVEDLVFIWNMTDPLVVNTEIELPQLDISNNYTTDCTIEYSTGNFTCLAIVFNLRRR 262
            :.|||..:||.|:|..|..| |:....:.||||..|....|.|.....:||.:..|::.|.|:|.
  Fly   192 VEIESYGYTVSDVVMYWKPT-PVRGVEDAELPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRN 255

  Fly   263 LGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAID 327
            :||.:|.||:||.|||::||:||||..||..|||.||:|::||:.|.:|..:.|||.:|||||||
  Fly   256 IGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAID 320

  Fly   328 VWMSSCSVFVFLSLMEFAVVN-NFMGPVATKAMK----------GYSD--------ENISDLDDL 373
            :::..|.||||.:|:|:|.|| .:.|..|.|.:|          |.|:        |:|.:|.|:
  Fly   321 IYLVMCFVFVFAALLEYAAVNYTYWGKRAKKKIKKVKECCPGKIGKSERSETCSTTEDIIELQDV 385

  Fly   374 K-SALQHHRESIIEPQYDT--------------------FCHGH--------------------- 396
            : |.:...|........|:                    :..||                     
  Fly   386 RMSPIPSLRRGTYNATLDSIGTETMNLGKFPPSFRITRNYGTGHSQLRRRAQRGISTRPRMLHAL 450

  Fly   397 ---ATAI-----------YIDKFSRFFFPFSFFILNIVYWTTFL 426
               |:||           .|||:||..||.||...|:.||..::
  Fly   451 KRGASAIKATIPKIKDVNIIDKYSRMIFPISFLAFNLGYWLFYI 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HisCl1NP_731632.1 Neur_chan_LBD 67..262 CDD:280998 71/206 (34%)
Neur_chan_memb 270..>350 CDD:280999 45/80 (56%)
Lcch3NP_996469.1 LIC 15..493 CDD:273305 157/490 (32%)
Neur_chan_LBD 47..256 CDD:280998 74/215 (34%)
Neur_chan_memb 263..490 CDD:280999 73/226 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18945
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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