DRSC/TRiP Functional Genomics Resources

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Protein Alignment HisCl1 and glra1

DIOPT Version :9

Sequence 1:NP_731632.1 Gene:HisCl1 / 41426 FlyBaseID:FBgn0037950 Length:426 Species:Drosophila melanogaster
Sequence 2:XP_005173152.1 Gene:glra1 / 30676 ZFINID:ZDB-GENE-991117-1 Length:459 Species:Danio rerio


Alignment Length:428 Identity:155/428 - (36%)
Similarity:224/428 - (52%) Gaps:73/428 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 VSHYESSL--SLPDILPIPSK---TYDKNRAPKLLGQPTVVYFHVTVLSLDSINEESMTYVTDIF 106
            ||.|::.:  :...:.|..||   |:.|       |.|..|..::.:.|..||.|.:|.|..:||
Zfish    45 VSGYDARIRPNFKVVDPQGSKSDGTHKK-------GPPVNVTCNIFINSFGSIAETTMDYRVNIF 102

  Fly   107 LAQSWRDPRLRLPENMSEQYRILDVD--WLHSIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKT 169
            |.|.|.||||...|...:.   ||:|  .|.|||:||.||.|.|...|||::..|..|.:..:..
Zfish   103 LRQQWNDPRLAYSEYPDDS---LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGN 164

  Fly   170 LLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTVEDLVFIWNMTDPLVVNTEIELPQLDIS 234
            :||..::||||:|.|..:::|.|.|.|.|.:||..:|:.||:|.|:....:.|...:.|||..:.
Zfish   165 VLYSIRITLVLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWDEKGAVQVADGLTLPQFILK 229

  Fly   235 N----NYTTDCTIEYSTGNFTCLAIVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPAR 295
            .    .|   ||..|:||.|||:...|:|.|::||:|...||||.|||::||:||||..:|.|||
Zfish   230 EEKDLRY---CTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPAR 291

  Fly   296 VTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDVWMSSCSVFVFLSLMEFAVVN------------ 348
            |.||:|::||:.||::.|:.|||.||||||||:||:.|.:|||.:|:|:|.||            
Zfish   292 VGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFIARQHKELLRF 356

  Fly   349 -----------------NF----MGPVATK-----AMKGYSDENISDLDDLKSALQHHRESIIEP 387
                             :|    |||...:     |:||.::...:..:..:..::..|:..|  
Zfish   357 QRRRRHLKEDEAGDGRFSFAAYGMGPACLQAKDGMAIKGNNNNAPTSTNPPEKTVEEMRKLFI-- 419

  Fly   388 QYDTFCHGHATAIYIDKFSRFFFPFSFFILNIVYWTTF 425
                     :.|..||..||..||..|.|.||.||.|:
Zfish   420 ---------SRAKRIDTVSRVAFPLVFLIFNIFYWITY 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HisCl1NP_731632.1 Neur_chan_LBD 67..262 CDD:280998 73/200 (37%)
Neur_chan_memb 270..>350 CDD:280999 48/108 (44%)
glra1XP_005173152.1 LIC 7..448 CDD:273305 154/426 (36%)
Neur_chan_LBD 38..259 CDD:280998 81/226 (36%)
Neur_chan_memb 266..445 CDD:280999 68/189 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45222
OrthoDB 1 1.010 - - D276914at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18945
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
44.030

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