DRSC/TRiP Functional Genomics Resources

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Protein Alignment HisCl1 and GABRR2

DIOPT Version :9

Sequence 1:NP_731632.1 Gene:HisCl1 / 41426 FlyBaseID:FBgn0037950 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_002034.3 Gene:GABRR2 / 2570 HGNCID:4091 Length:465 Species:Homo sapiens


Alignment Length:436 Identity:140/436 - (32%)
Similarity:215/436 - (49%) Gaps:75/436 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 LPIPSKTYDKN---------RAPKLL-------------GQPTV-VYFHVTVLSLDSINEESMTY 101
            :|.||..|.||         :..:||             |.|.: |...|.|.|||||:|..|.:
Human    34 MPKPSHLYKKNLDVTKIRKGKPQQLLRVDEHDFSMRPAFGGPAIPVGVDVQVESLDSISEVDMDF 98

  Fly   102 VTDIFLAQSWRDPRLRLPENMSEQYRILDVDWLHSIWRPDCFFKNAKKVTFHEMSIPNHYLWLYH 166
            ...::|...|:|.||.. .:.|.:....|...:..||.||.||.::|:...|:.:..|..|.::.
Human    99 TMTLYLRHYWKDERLAF-SSASNKSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFP 162

  Fly   167 DKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTVEDLVFIW-NMTDPLVVNTEIELPQ 230
            |..:||..::|:...|.|.|..:|.|:|.||:.:||.::|.|||:..| |..:.|..:.:|.|.|
Human   163 DGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQ 227

  Fly   231 LDISNNYTTDCTIEY-STGNFTCLAIVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPA 294
            ..|...:||.....| |||.:..|.|.|.|||.:.:.|..||.|:.|:|::||:||||...|:||
Human   228 FLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPA 292

  Fly   295 RVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDVWMSSCSVFVFLSLMEFAVVNN---------- 349
            ||:||:|::||:.|..|....|:|.||||||:|:::....||||||::|:|.||.          
Human   293 RVSLGITTVLTMTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKER 357

  Fly   350 --------FMGPVATKAM--------------KGYSDENISDLDDLKSALQHH-----------R 381
                    ..|.:.:|.|              .||...:|...::.:..:..|           :
Human   358 KLREKFPCMCGMLHSKTMMLDGSYSESEANSLAGYPRSHILTEEERQDKIVVHLGLSGEANAARK 422

  Fly   382 ESIIEPQ--YDTFCHGHATAIYIDKFSRFFFPFSFFILNIVYWTTF 425
            :.:::.|  :..|.:.||    |||:||..||.|:...|::||:.|
Human   423 KGLLKGQTGFRIFQNTHA----IDKYSRLIFPASYIFFNLIYWSVF 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HisCl1NP_731632.1 Neur_chan_LBD 67..262 CDD:280998 70/219 (32%)
Neur_chan_memb 270..>350 CDD:280999 42/97 (43%)
GABRR2NP_002034.3 Neur_chan_LBD 51..464 CDD:332142 133/417 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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