DRSC/TRiP Functional Genomics Resources

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Protein Alignment HisCl1 and GABRR1

DIOPT Version :9

Sequence 1:NP_731632.1 Gene:HisCl1 / 41426 FlyBaseID:FBgn0037950 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_002033.2 Gene:GABRR1 / 2569 HGNCID:4090 Length:479 Species:Homo sapiens


Alignment Length:425 Identity:145/425 - (34%)
Similarity:215/425 - (50%) Gaps:67/425 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 PDILPIP-SKT--------YDKNRAPKLLGQPTVVYFHVTVLSLDSINEESMTYVTDIFLAQSWR 112
            |||...| :|:        :|.:..|...|....|...|.|.|||||:|..|.:...::|...|:
Human    65 PDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWK 129

  Fly   113 DPRLRLP--ENMSEQYRILDVDWLHSIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSK 175
            |.||..|  .|:|..:   |...:..||.||.||.::|:...|:.:..|..|.:..|..:||..:
Human   130 DERLSFPSTNNLSMTF---DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLR 191

  Fly   176 LTLVLSCAMKFESYPHDTQICSMMIESLSHTVEDLVFIWNM-TDPLVVNTEIELPQLDISNNYTT 239
            :|:...|.|.|..:|.|||.||:.|||.::|.:||:..|.. .|.|..:..|.|.|..|...:||
Human   192 VTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTT 256

  Fly   240 DCTIEY-STGNFTCLAIVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSL 303
            .....| |||.:..|.|.|.|||.:.:.|..||.|:.|:|::||:||||...|:||||.||:|::
Human   257 TKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTV 321

  Fly   304 LTLATQNTQSQQSLPPVSYVKAIDVWMSSCSVFVFLSLMEFAVVN-------------------- 348
            ||::|..|....|:|.|||:||:|:::....||||||::|:|.||                    
Human   322 LTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKEQKLREKLPCT 386

  Fly   349 NFMGPVATKAMKG-YSDENISDLDDL--------------------KSALQH--HRESIIEPQYD 390
            :.:.|..|..:.| |||..::|||:.                    :|:.|.  .|.|.:..:.|
Human   387 SGLPPPRTAMLDGNYSDGEVNDLDNYMPENGEKPDRMMVQLTLASERSSPQRKSQRSSYVSMRID 451

  Fly   391 TFCHGHATAIYIDKFSRFFFPFSFFILNIVYWTTF 425
            |    ||    |||:||..||.::.:.|::||:.|
Human   452 T----HA----IDKYSRIIFPAAYILFNLIYWSIF 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HisCl1NP_731632.1 Neur_chan_LBD 67..262 CDD:280998 69/198 (35%)
Neur_chan_memb 270..>350 CDD:280999 41/99 (41%)
GABRR1NP_002033.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 32..55
LIC 75..478 CDD:273305 139/413 (34%)
Neur_chan_LBD 76..281 CDD:280998 70/207 (34%)
Neur_chan_memb 288..475 CDD:280999 66/194 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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