DRSC/TRiP Functional Genomics Resources

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Protein Alignment HisCl1 and GABRD

DIOPT Version :9

Sequence 1:NP_731632.1 Gene:HisCl1 / 41426 FlyBaseID:FBgn0037950 Length:426 Species:Drosophila melanogaster
Sequence 2:XP_016856425.1 Gene:GABRD / 2563 HGNCID:4084 Length:687 Species:Homo sapiens


Alignment Length:402 Identity:128/402 - (31%)
Similarity:199/402 - (49%) Gaps:45/402 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 YDKNRAPKLLGQPTVVYFHVTVLSLDSINEESMTYVTDIFLAQSWRDPRLRLPENMSEQYRILDV 131
            |.:|..|.:.|.|..|...:.|.|:|.|:|.:|.|...:||.|||||.||..  |.:.:...||.
Human   286 YARNFRPGIGGPPVNVALALEVASIDHISEANMEYTMTVFLHQSWRDSRLSY--NHTNETLGLDS 348

  Fly   132 DWLHSIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQIC 196
            .::..:|.||.|..|||...||::::.|..:.|..|..:||..::|..::|.|....||.|.|.|
Human   349 RFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTVACDMDLAKYPMDEQEC 413

  Fly   197 SMMIESLSHTVEDLVFIWNMTDPLVVNTE-IELPQLDI-SNNYTTDCTIEYSTGNFTCLAIVFNL 259
            .:.:||..::.||:|:.|:.:...:...: ::|.|..| |..:||:.....|.|.|..|::.|:|
Human   414 MLDLESYGYSSEDIVYYWSESQEHIHGLDKLQLAQFTITSYRFTTELMNFKSAGQFPRLSLHFHL 478

  Fly   260 RRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVK 324
            ||..|.::..:|:||.|:|.|||:||||...|:||||:||:|::||:.|....::.|||..|.:|
Human   479 RRNRGVYIIQSYMPSVLLVAMSWVSFWISQAAVPARVSLGITTVLTMTTLMVSARSSLPRASAIK 543

  Fly   325 AIDVWMSSCSVFVFLSLMEFAVVN-------NFMGPVATKAMKGYSD-ENISDLDDLKSA----- 376
            |:||:...|.||||.:|:|:|..:       .....|.....:...| .|...|..|.:|     
Human   544 ALDVYFWICYVFVFAALVEYAFAHFNADYRKKQKAKVKVSRPRAEMDVRNAIVLFSLSAAGVTQE 608

  Fly   377 -------------LQHHRESIIEPQYDTFCHGHA---------------TAIYIDKFSRFFFPFS 413
                         |.....|:.....:|...|.|               .|..||.::|..||.:
Human   609 LAISRRQRRVPGNLMGSYRSVGVETGETKKEGAARSGGQGGIRARLRPIDADTIDIYARAVFPAA 673

  Fly   414 FFILNIVYWTTF 425
            |..:|::||..:
Human   674 FAAVNVIYWAAY 685

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HisCl1NP_731632.1 Neur_chan_LBD 67..262 CDD:280998 66/196 (34%)
Neur_chan_memb 270..>350 CDD:280999 39/86 (45%)
GABRDXP_016856425.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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