DRSC/TRiP Functional Genomics Resources

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Protein Alignment HisCl1 and GABRA5

DIOPT Version :9

Sequence 1:NP_731632.1 Gene:HisCl1 / 41426 FlyBaseID:FBgn0037950 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_000801.1 Gene:GABRA5 / 2558 HGNCID:4079 Length:462 Species:Homo sapiens


Alignment Length:403 Identity:129/403 - (32%)
Similarity:195/403 - (48%) Gaps:56/403 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 YDKNRAPKLLGQPTVVYFHVTVLSLDSINEESMTYVTDIFLAQSWRDPRLRLPENMSEQYRILDV 131
            ||....|.|..:.|.|...:.|.|...:::..|.|..|:|..|||:|.|||....|..    |.:
Human    60 YDNRLRPGLGERITQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDERLRFKGPMQR----LPL 120

  Fly   132 DWL--HSIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQ 194
            :.|  ..||.||.||.|.||...|.|:.||..|.|..|.||||..:||:...|.|:.|.:|.|..
Human   121 NNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLTISAECPMQLEDFPMDAH 185

  Fly   195 ICSMMIESLSHTVEDLVFIW--NMTDPLVVNTE-IELPQLDISNNYTTDCTIEYSTGNFTCLAIV 256
            .|.:...|.::...::|::|  ..|..:||..: ..|.|..:.........|..|||.:|.:...
Human   186 ACPLKFGSYAYPNSEVVYVWTNGSTKSVVVAEDGSRLNQYHLMGQTVGTENISTSTGEYTIMTAH 250

  Fly   257 FNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVS 321
            |:|:|::||.:..||:|..:.|::|.:|||:..|::|||...|||::||:.|.:..::.|||.|:
Human   251 FHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVA 315

  Fly   322 YVKAIDVWMSSCSVFVFLSLMEFAVVNNFMGPVATKAMKGYSDENISDLDDLKSALQHHRESIIE 386
            |..|:|.:::.|..|||.:|:|||.||.|     ||  :|::.:....|:..|  ::..||.|:.
Human   316 YATAMDWFIAVCYAFVFSALIEFATVNYF-----TK--RGWAWDGKKALEAAK--IKKKREVILN 371

  Fly   387 PQYDTFCHG------------------HATAI--------------------YIDKFSRFFFPFS 413
            ...:.|..|                  :.|::                    .|||.||..||..
Human   372 KSTNAFTTGKMSHPPNIPKEQTPAGTSNTTSVSVKPSEEKTSESKKTYNSISKIDKMSRIVFPVL 436

  Fly   414 FFILNIVYWTTFL 426
            |...|:|||.|:|
Human   437 FGTFNLVYWATYL 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HisCl1NP_731632.1 Neur_chan_LBD 67..262 CDD:280998 65/199 (33%)
Neur_chan_memb 270..>350 CDD:280999 35/79 (44%)
GABRA5NP_000801.1 LGIC_ECD_GABAAR_A5 58..256 CDD:349839 65/199 (33%)
LGIC_TM_GABAAR_alpha 259..445 CDD:349854 58/194 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 377..412 3/34 (9%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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