DRSC/TRiP Functional Genomics Resources

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Protein Alignment HisCl1 and GABRA4

DIOPT Version :9

Sequence 1:NP_731632.1 Gene:HisCl1 / 41426 FlyBaseID:FBgn0037950 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_000800.2 Gene:GABRA4 / 2557 HGNCID:4078 Length:554 Species:Homo sapiens


Alignment Length:486 Identity:121/486 - (24%)
Similarity:193/486 - (39%) Gaps:128/486 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 YDKNRAPKLLGQPTVVYFHVTVLSLDSINEESMTYVTDIFLAQSWRDPRLRLPENMSEQYRILDV 131
            ||....|...|..|.|...:.|.|...:::..|.|..|:|..|:|.|.||:. :...|..|:.::
Human    59 YDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDKRLKY-DGPIEILRLNNM 122

  Fly   132 DWLHSIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQIC 196
             .:..:|.||.||:|.||...|.|:.||....:..:.|:||..:||:...|.|:...:|.|...|
Human   123 -MVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHAC 186

  Fly   197 SMMIESLSHTVEDLVFIWNMTDPLVVNTEIE---LPQLDISNNYTTDCTIEYSTGNFTCLAIVFN 258
            .:...|.::...::::.|.......|....|   |.|.|:.....:..||:..||.:..:.:.|:
Human   187 PLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFH 251

  Fly   259 LRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYV 323
            |||::||.:..||||..:.|::|.:||||..|::|||...|:|::||:.|.:..::.|||.|||.
Human   252 LRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYA 316

  Fly   324 KAIDVWMSSCSVFVFLSLMEFAVVNNFMGPVATKAMKGYS------------------------D 364
            .|:|.:::.|..|||.:|:|||.||.|......||.:..|                        :
Human   317 TAMDWFIAVCFAFVFSALIEFAAVNYFTNIQMEKAKRKTSKPPQEVPAAPVQREKHPEAPLQNTN 381

  Fly   365 ENI-------------SDLDDLKSALQHHRESIIEPQYDT--------------FCHGHA----- 397
            .|:             ||:.:......|..:|....|..:              |...:|     
Human   382 ANLNMRKRTNALVHSESDVGNRTEVGNHSSKSSTVVQESSKGTPRSYLASSPNPFSRANAAETIS 446

  Fly   398 ----------TAI---------------------------------------------------- 400
                      |:|                                                    
Human   447 AARALPSASPTSIRTGYMPRKASVGSASTRHVFGSRLQRIKTTVNTIGATGKLSATPPPSAPPPS 511

  Fly   401 -----YIDKFSRFFFPFSFFILNIVYWTTFL 426
                 .|||::|..||.:|...|:|||..:|
Human   512 GSGTSKIDKYARILFPVTFGAFNMVYWVVYL 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HisCl1NP_731632.1 Neur_chan_LBD 67..262 CDD:280998 55/197 (28%)
Neur_chan_memb 270..>350 CDD:280999 37/79 (47%)
GABRA4NP_000800.2 Neur_chan_LBD 13..541 CDD:332142 120/483 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 350..381 3/30 (10%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 397..435 5/37 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 452..471 2/18 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 495..515 0/19 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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