DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HisCl1 and glra3

DIOPT Version :9

Sequence 1:NP_731632.1 Gene:HisCl1 / 41426 FlyBaseID:FBgn0037950 Length:426 Species:Drosophila melanogaster
Sequence 2:XP_021333244.1 Gene:glra3 / 192124 ZFINID:ZDB-GENE-020402-1 Length:489 Species:Danio rerio


Alignment Length:428 Identity:152/428 - (35%)
Similarity:213/428 - (49%) Gaps:75/428 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 YDKNRAPKLLGQPTVVYFHVTVLSLDSINEESMTYVTDIFLAQSWRDPRLRLPENMSEQYRILDV 131
            ||....|...|.|..|..::.:.|..||.|.:|.|..:|||.|.|.||||...|...:.   ||:
Zfish    57 YDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS---LDL 118

  Fly   132 D--WLHSIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQ 194
            |  .|.|||:||.||.|.|...|||::..|..|.::.:..:||..:|||.|||.|..:::|.|.|
Zfish   119 DPSMLDSIWKPDLFFANEKGAHFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQ 183

  Fly   195 ICSMMIESLSHTVEDLVFIWNMTDPLVVNTEIELPQLDISNNYTTD---CTIEYSTGNFTCLAIV 256
            .|.|.:||..:|:.||:|.|....|:.|...:.|||..:.:.  :|   ||..|:||.|||:.:.
Zfish   184 TCIMQLESFGYTMNDLIFEWQEKGPVQVADGLTLPQFILKDE--SDLRYCTKHYNTGKFTCIEVR 246

  Fly   257 FNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVS 321
            |:|.|::||:|...||||.|||::||:||||..:|.||||.||:|::||:.||::.|:.|||.||
Zfish   247 FHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRTSLPKVS 311

  Fly   322 YVKAIDVWMSSCSVFVFLSLMEFAVVNNFMG-------------PVATKAMKGYSDENISD---- 369
            ||||||:||:.|.:|||.:|:|:|.| ||:.             ..:.|......||.:::    
Zfish   312 YVKAIDIWMAVCLLFVFSALLEYAAV-NFVSRQHKELLRFRRRRKKSGKTFDQTFDEELAESLRR 375

  Fly   370 ----------------LDDLKSALQHHRESIIE---------------------PQYDTFCHGHA 397
                            ||......:..|||.:.                     |.......|.:
Zfish   376 INGSRSAEPVYGSMGQLDQTNDMEEEVRESRLSFTPNAGKDGAVPKTANNAATTPSEPAVAPGKS 440

  Fly   398 ----------TAIYIDKFSRFFFPFSFFILNIVYWTTF 425
                      .|..||..||..||.:|...||.||..:
Zfish   441 HEEMRKLFIDRAKKIDTVSRAGFPLAFLFFNIFYWVLY 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HisCl1NP_731632.1 Neur_chan_LBD 67..262 CDD:280998 77/199 (39%)
Neur_chan_memb 270..>350 CDD:280999 47/79 (59%)
glra3XP_021333244.1 LIC 13..478 CDD:273305 152/426 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45222
OrthoDB 1 1.010 - - D276914at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18945
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.930

Return to query results.
Submit another query.