DRSC/TRiP Functional Genomics Resources

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Protein Alignment HisCl1 and lgc-58

DIOPT Version :9

Sequence 1:NP_731632.1 Gene:HisCl1 / 41426 FlyBaseID:FBgn0037950 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_001368738.1 Gene:lgc-58 / 191637 WormBaseID:WBGene00001587 Length:553 Species:Caenorhabditis elegans


Alignment Length:548 Identity:146/548 - (26%)
Similarity:234/548 - (42%) Gaps:168/548 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 YRNNTESAELVSHYESSLSLP------DILPIPSKTYDKNRAPKL---LGQPTVVYFHVTVLSLD 92
            |||:.:       .|:|.|.|      ::|....:.|| |::|.:   ..:.|||...:.:..:.
 Worm    12 YRNSPK-------VEASRSEPVPIYLDNLLNAGRQVYD-NQSPPVQHDKEEVTVVELAMYIEGMS 68

  Fly    93 SINEESMTYVTDIFLAQSWRDPRLRLPENMSEQYRILDVDWLHSIWRPDCFFKNAKKVTFHEMSI 157
            |...::|.:..|::..|.||||  ||..|.:.:..:.|...||.:|:||.:|.||:...|||::.
 Worm    69 SFRTQTMDFQLDVYFQQFWRDP--RLAHNETRRVLVKDKAVLHKMWKPDVYFANARIAEFHEVTQ 131

  Fly   158 PNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTVEDLVFIWNMTDPLVV 222
            ||..:|:..|.::||.:::::|:.|.:..|.:|.|:|.|.:.|.|.::|.|.||..|...:|:..
 Worm   132 PNFLVWIQPDGSILYDTRISMVVVCTLNLEKWPLDSQRCHLRILSYAYTTEQLVIKWKEDEPITR 196

  Fly   223 NTEIELPQLDISNNYTTDCTIEYSTGNFTCLAIVFNLRRRLGYHLFHTYIPSALIVVMSWISFWI 287
            |..|.:..:.|.:.|...|...||||.::|:...|.::|.:.:|:..:|:|:.||||:||.|||:
 Worm   197 NPNIAMSDMHIVDLYPGLCDGNYSTGTWSCVTAEFFVKREITHHVMQSYVPTTLIVVISWFSFWL 261

  Fly   288 KPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDVWMSSCSVFVFLSLMEFAVVNNFM- 351
            ..||:||||:|.:|:||||:||...::.:||.|||:|||||||.:|.:|||..::||.:||... 
 Worm   262 DVEAVPARVSLAITTLLTLSTQANAARMALPEVSYMKAIDVWMGACMMFVFGVMIEFTIVNYAQR 326

  Fly   352 -----------------------GPVATKAMKG-------------------------------- 361
                                   |....|..:|                                
 Worm   327 QGRKWHRTDAEIVMASSLESVKSGNAEKKPSRGDLGAHARHLFLRLRTNERQHLVEDPPEQIAMN 391

  Fly   362 --------------YSDE---------------------------NISDL--------------- 370
                          :|||                           |:|::               
 Worm   392 DTAYDTVSQAYSNSFSDEEAAPVVQPPQNEDAEAQEEVWAEQKETNLSEVWKESDPAERLAHWNE 456

  Fly   371 --DDLKSALQ-----HHRESIIEPQYDTFCH------------------------------GHAT 398
              :|..|.|.     |.|....|...:..|:                              |...
 Worm   457 KENDASSPLMGNGRAHVRYGAAEKMKNRKCNDSSRKKEKWSSAIKQIQKHKRNGSVFGKIAGRNR 521

  Fly   399 AIYIDKFSRFFFPFSFFILNIVYWTTFL 426
            |..||:.||:.||.:|.|.|:.||..:|
 Worm   522 AKKIDQTSRWIFPLTFIIFNLTYWIYYL 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HisCl1NP_731632.1 Neur_chan_LBD 67..262 CDD:280998 62/197 (31%)
Neur_chan_memb 270..>350 CDD:280999 45/79 (57%)
lgc-58NP_001368738.1 LIC 30..548 CDD:273305 138/520 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D276914at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18945
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.020

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