DRSC/TRiP Functional Genomics Resources

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Protein Alignment HisCl1 and lgc-45

DIOPT Version :9

Sequence 1:NP_731632.1 Gene:HisCl1 / 41426 FlyBaseID:FBgn0037950 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_001335538.1 Gene:lgc-45 / 189345 WormBaseID:WBGene00021146 Length:1046 Species:Caenorhabditis elegans


Alignment Length:397 Identity:135/397 - (34%)
Similarity:218/397 - (54%) Gaps:25/397 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 RNNTESAELVSHYESS---LSLPDILPIPSKT-YDKNRAPKLL-GQPTVVYFHVTVLSLDSINEE 97
            ||:||..|::|....|   |....|||:.:|. ||...||.:. |...||.|.:.:.|:.:....
 Worm   654 RNDTEVDEILSRTNGSTKNLGGSFILPVLNKNQYDPFSAPIVFQGSAVVVRFGIYIESMSNFQTS 718

  Fly    98 SMTYVTDIFLAQSWRDPRLRLPENMSEQYRILDVDWLHSIWRPDCFFKNAKKVTFHEMSIPNHYL 162
            :|.|..||:|..||||.||..|  ..:...:.:.|.|..|||||.||.|||:..|||::..|..:
 Worm   719 TMDYDMDIYLMMSWRDARLVNP--YDKPILVKEEDILEKIWRPDPFFANAKEAEFHEVTFLNFLM 781

  Fly   163 WLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTVEDLVFIW--NMTDPLVVNTE 225
            .::.|..:||.:::.:..||.:....||||.|.|.::|:|.::.||.:.|.|  ...|.:..|.:
 Worm   782 RIFPDGLVLYETRVKIKPSCNLILCKYPHDKQTCDLLIKSFAYPVETVRFEWFTRRKDAIDKNPD 846

  Fly   226 IELPQLDISNNYTTDCTIEYSTGNFTCLAIVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPE 290
            ::||:|.|....||.|..|..:|.|:||..||.|:|.:|:|:..||||::|.::.||:..|:..|
 Worm   847 VKLPELYIDRYETTTCPNERKSGAFSCLRAVFRLKRDVGFHIAQTYIPTSLALMFSWVGVWLPEE 911

  Fly   291 AIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDVWMSSCSVFVFLSLMEFAVVNNFMGPVA 355
            .:..|:.:.:|.||||:|::..:::.||.|||:||||:|....:.|||.:|::...|..|  ...
 Worm   912 FMEGRIGVAITVLLTLSTESAGAREHLPSVSYLKAIDLWFGFITGFVFFTLLQTLFVIGF--DKR 974

  Fly   356 TKAMKGYSDENISDLDDLKSALQHHRESIIE--PQYDTFCHGHATAIYIDKFSRFFFPFSFFILN 418
            ...:|.::....:|:      .:..||::::  .:|      |.|..|:|.|.|.|:|.||.:..
 Worm   975 ANQLKKWAGRKTADI------TEEIREALLQKATRY------HKTGRYLDNFCRVFYPLSFILFL 1027

  Fly   419 IVYWTTF 425
            ::|:..|
 Worm  1028 LMYYFVF 1034

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HisCl1NP_731632.1 Neur_chan_LBD 67..262 CDD:280998 71/197 (36%)
Neur_chan_memb 270..>350 CDD:280999 31/79 (39%)
lgc-45NP_001335538.1 Neur_chan_LBD 687..>969 CDD:332142 104/283 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_129194
Panther 1 1.100 - - O PTHR18945
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
65.770

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