DRSC/TRiP Functional Genomics Resources

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Protein Alignment HisCl1 and exp-1

DIOPT Version :9

Sequence 1:NP_731632.1 Gene:HisCl1 / 41426 FlyBaseID:FBgn0037950 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_495229.3 Gene:exp-1 / 186801 WormBaseID:WBGene00001373 Length:539 Species:Caenorhabditis elegans


Alignment Length:343 Identity:101/343 - (29%)
Similarity:166/343 - (48%) Gaps:20/343 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 NTESAELVSHYESSLSLPDILPIPSK-TYDKNRAPK-LLGQPTVVYFHVTVLSLDSINEESMTYV 102
            ||||.......:|.....|.|....: .||..:.|: ..|:.|.|...|.|.::.:::|.:|.|.
 Worm    83 NTESVFSSGGVDSYGETRDFLQFLRRIQYDHRQVPENEKGEATYVEVSVVVSNIRAVSEVTMDYA 147

  Fly   103 TDIFLAQSWRDPRL----RLPENMSEQYRILDVDWLHSIWRPDCFFKNAKKVTFHEMSIPNHYLW 163
            .::|..:|||||||    :|.:|.:|  ..|...:.:.:|.||.|..||......:.:..:|...
 Worm   148 LELFYRESWRDPRLQYDRKLFKNKTE--LALHESYTNFLWFPDTFVPNAIASKNPQRNSISHRSL 210

  Fly   164 LYHDKT--LLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTVEDLVFIWNMTDPLVVN-TE 225
            |..|:|  |||..:::||..|.|....:|.|.|:|.:.|||..:|.:.:|:.|:......:. .:
 Worm   211 LRLDETGKLLYSRRISLVCECTMDLTLFPFDKQLCKLGIESYGYTADHVVYKWSKGARTALELKK 275

  Fly   226 IELPQLDISNNYTTDCTIEYSTGNFTCLAIVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPE 290
            |.||...|...|.|.....|:|||::.|.:.|...|..|:......|||..:|:.||:|.|::.|
 Worm   276 IRLPDFTIQEAYVTSQMESYATGNYSRLYVCFVFSRSSGFCFLQLIIPSTAVVITSWVSLWMETE 340

  Fly   291 A---IPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDVWMSSCSVFVFLSLMEFAVVNNFMG 352
            .   ....:.|.:|.|:      ....:.:|.|||:||:|:::..|.:.|||||::.|:|.....
 Worm   341 TEFQDMISIILAITFLI------FSYNEMMPRVSYIKAMDIYLGVCFMIVFLSLIKLALVKYMRQ 399

  Fly   353 PVATKAMKGYSDENISDL 370
            .:...:..|.|...:|.:
 Worm   400 KIMLTSDSGNSLREMSQM 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HisCl1NP_731632.1 Neur_chan_LBD 67..262 CDD:280998 62/202 (31%)
Neur_chan_memb 270..>350 CDD:280999 27/82 (33%)
exp-1NP_495229.3 LIC 103..515 CDD:273305 95/323 (29%)
Neur_chan_LBD 111..311 CDD:280998 62/201 (31%)
Neur_chan_memb 320..>397 CDD:280999 27/82 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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