DRSC/TRiP Functional Genomics Resources

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Protein Alignment HisCl1 and acc-3

DIOPT Version :9

Sequence 1:NP_731632.1 Gene:HisCl1 / 41426 FlyBaseID:FBgn0037950 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_508810.2 Gene:acc-3 / 186307 WormBaseID:WBGene00018880 Length:517 Species:Caenorhabditis elegans


Alignment Length:491 Identity:143/491 - (29%)
Similarity:210/491 - (42%) Gaps:122/491 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 ESSLS------LPDILPIPSK-------------TYDKNRAPKLLGQ------PT----VVYFHV 86
            |.||.      ||...|.|:.             |.||....|||..      |:    :|:..|
 Worm    30 EQSLEENKFFPLPPTTPFPTNAVAATDEDGEELCTSDKTIIEKLLNNYKSFRTPSESGVIVWIEV 94

  Fly    87 TVLSLDSINEESMTYVTDIFLAQSWRDPRLRLPE------NMSEQYRILDVDWLHSIWRPDCFFK 145
            .|..::|:||.:..:..||::.:.|.|..||...      |:|....|||     .||:|:..|.
 Worm    95 WVQEVNSVNEITSDFDMDIYVTELWMDSALRYEHLNPCKYNLSLNSEILD-----QIWKPNTVFI 154

  Fly   146 NAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTVEDL 210
            |:|....|:....|.:|.:|.:.|:....::.:...|:|.|.::|.|.|.|.:.:||.|:..:::
 Worm   155 NSKSANIHKSPFKNVFLMIYPNGTVWVNYRVQVKGPCSMDFSAFPMDQQSCHLTLESFSYNNQEV 219

  Fly   211 VFIW-NMTDPL-VVNTEIELPQLDISNNYTTDCTIE-YSTGNFTCLAIVFNLRRRLGYHLFHTYI 272
            ...| |.|.|| ::..||.||.. :.:||:|....| |..|.:..|.:.|...||.|:::|..||
 Worm   220 DMQWMNWTTPLSLLKKEIVLPDF-VMSNYSTSLKHEIYPAGVWNELTMTFVFSRRYGWYIFQAYI 283

  Fly   273 PSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDVWMSSCSVFV 337
            |:.|.:.:|||||.:.|:.||||..|||.|||.|..|.....::||.||||||:||||..|..||
 Worm   284 PTYLTIFISWISFCLGPKMIPARTMLGVNSLLALTFQFGNIMRNLPRVSYVKALDVWMLVCLTFV 348

  Fly   338 FLSLMEFAVVNNFMG---------------PVATKAMKGYSDENISDL----------------- 370
            |.||:|.|::.: ||               ..|||..||..:...|.|                 
 Worm   349 FCSLLELAIIGS-MGARSENRQAQQQKQQDEEATKHQKGRENSTCSHLMSPSSCPNSPRICRNHI 412

  Fly   371 -DDLKSALQHH-------RESIIEPQYDTFCHG-------------------------------- 395
             :|:..:.:.:       |:.:|.....|..|.                                
 Worm   413 PNDVPQSFKSYGSTDPRMRKRLIIASSSTISHAPNANRSEKVLLLDGLEETQFSQVETKFSSMAS 477

  Fly   396 -----HATAIYIDKFSRFFFPFSFFILNIVYWTTFL 426
                 |.|...||:.|...||..|.:.||:|||.:|
 Worm   478 IKMKKHWTTEEIDRLSMIMFPGLFTLFNIIYWTYYL 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HisCl1NP_731632.1 Neur_chan_LBD 67..262 CDD:280998 61/213 (29%)
Neur_chan_memb 270..>350 CDD:280999 42/79 (53%)
acc-3NP_508810.2 Neur_chan_LBD 69..512 CDD:332142 132/449 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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