DRSC/TRiP Functional Genomics Resources

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Protein Alignment HisCl1 and lgc-51

DIOPT Version :9

Sequence 1:NP_731632.1 Gene:HisCl1 / 41426 FlyBaseID:FBgn0037950 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_001293359.1 Gene:lgc-51 / 184377 WormBaseID:WBGene00017399 Length:450 Species:Caenorhabditis elegans


Alignment Length:435 Identity:123/435 - (28%)
Similarity:185/435 - (42%) Gaps:95/435 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 ILPIPSKTYDKNRAPKLLGQPTVVYFHVTVLSLDSINEESMTYVTDIFLAQSWRDPRL------R 117
            ||.:....|.::    |.|.|..|...|||..:..::..|.::..||:.:..|.||||      .
 Worm    35 ILDVIMANYSRS----LPGNPVGVQVEVTVQDVMELSVLSNSFTADIWFSSIWYDPRLAYSHLDN 95

  Fly   118 LPENMSEQYRILDVDWLHSIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSC 182
            ..:|:|     .|..:...||.|:....|.|....|....||..|.|..:.|:....::.:...|
 Worm    96 CRQNLS-----FDDRFEKLIWSPNVCIVNTKSAHVHRSPKPNVLLMLLPNGTIWLNYRIRVQSPC 155

  Fly   183 AMKFESYPHDTQICSMMIESLSHTVEDLVFIWNMTDPLVVNTEIELPQLDISNNYTTDCTIEYST 247
            :|....:|.|||.|.::.||.|:....:...| |.:|:.|..||.|...|:|...|:..|..|..
 Worm   156 SMDLARFPIDTQYCQLVFESYSYNTASVSVNW-MANPVTVLPEISLADFDLSRYRTSRHTEVYKA 219

  Fly   248 GNFTCLAIVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQ 312
            |.:..|.:.|...|:.|:::...|:|:.:.:.:|||:|.|..:|:|||:.|||.||::|..|...
 Worm   220 GEWYRLTVEFEFTRKYGFYILQLYVPTYISLFISWIAFCIDTKALPARIVLGVNSLMSLTFQFGN 284

  Fly   313 SQQSLPPVSYVKAIDVWMSSCSVFVFLSLMEFAVVNNFMGPVATKAMKGYSDENI--------SD 369
            ..:||||||||||||:||.:|..|:|.||:|.|.|             .|.|:.:        :.
 Worm   285 IIRSLPPVSYVKAIDLWMCTCVGFIFASLLELAFV-------------AYQDKKLILKSGKSNAA 336

  Fly   370 LDDLKSALQHHRESIIEPQYD------------------TFCHG-----------------HATA 399
            :..|.|.|:|     .||.:|                  |...|                 ...|
 Worm   337 ISTLVSYLKH-----FEPYHDVSSPPPPAPLDEKKSMSRTTSTGTNRSRSELDGLDTKDLEEEIA 396

  Fly   400 IY------------------IDKFSRFFFPFSFFILNIVYWTTFL 426
            .|                  :|:.|...||.:|...|:||||.:|
 Worm   397 EYRKLAYARKKWRLLDFGANVDRISFIVFPLTFAAFNVVYWTYYL 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HisCl1NP_731632.1 Neur_chan_LBD 67..262 CDD:280998 55/200 (28%)
Neur_chan_memb 270..>350 CDD:280999 40/79 (51%)
lgc-51NP_001293359.1 LIC 34..440 CDD:273305 122/432 (28%)
Neur_chan_LBD 35..235 CDD:280998 58/209 (28%)
Neur_chan_memb 242..437 CDD:280999 60/212 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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