DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HisCl1 and acc-2

DIOPT Version :9

Sequence 1:NP_731632.1 Gene:HisCl1 / 41426 FlyBaseID:FBgn0037950 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_501567.1 Gene:acc-2 / 183758 WormBaseID:WBGene00008280 Length:445 Species:Caenorhabditis elegans


Alignment Length:446 Identity:128/446 - (28%)
Similarity:209/446 - (46%) Gaps:49/446 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 FRCLIALAIYLHALEQSIQHCHCVHGYRNNTESAELVS-----HYESSLSLP-------DILP-- 61
            |..|..|.:.:...|  :.:...||       ||||||     |:::: ..|       ||:.  
 Worm     3 FTLLSTLPVLIITTE--LDYSELVH-------SAELVSSSSYIHHKTN-KKPDNCTRDTDIIDRL 57

  Fly    62 IPSKTYDKNRAPKLLGQPTVVYFHVTVLSLDSINEESMTYVTDIFLAQSWRDPRLRLPE------ 120
            :....|:|.|.|:..|...||  .:.:.::.||:|.:..:..||::.::|.||.|....      
 Worm    58 LNGTGYNKFRIPQEEGMTVVV--EIWIQAITSIDELTNDFDMDIYITETWLDPALNFQTMTPCKG 120

  Fly   121 NMSEQYRILDVDWLHSIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMK 185
            |:|..:::||     .:|.|:..|.|:|....|.....:.:|.|:.:.|::...::.:...|::.
 Worm   121 NLSLNHQVLD-----RLWTPNSCFINSKVAQIHNSPFRSVFLMLFPNGTVMVNYRVRVKGPCSLD 180

  Fly   186 FESYPHDTQICSMMIESLSHTVEDLVFIWNMTDPLVVN-TEIELPQLDISNNYTTDCTIEYSTGN 249
            ..::|.|.|.||::.||.::..:::...|:..:..|.| ::|.||..|:....|......|..|.
 Worm   181 LSNFPLDLQKCSLIYESFNYNRQEVEMRWSDAEHPVFNLSKIMLPDFDLFEIQTERRQEPYPAGM 245

  Fly   250 FTCLAIVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQ 314
            :..|.:.....||..::....|:|:.|.:.:|||||.:...|||||..|||.|||.:........
 Worm   246 WDELHVTIIFERRFIWYFMQAYLPTYLTIFISWISFSLGSRAIPARTMLGVNSLLAIVFSFGNIM 310

  Fly   315 QSLPPVSYVKAIDVWMSSCSVFVFLSLMEFAVVNNFM---GPVATKAMKGYSDENISDLDDLKSA 376
            ::||.|||:|.|||||.....|:|.||:|.|:| .||   ..||.|..:.....||| .::....
 Worm   311 RNLPRVSYIKGIDVWMLVSMTFIFCSLLELAIV-GFMVRDETVAKKKQQKKISGNIS-REESPHG 373

  Fly   377 LQHHRESIIEPQYD------TFCHGHATAIYIDKFSRFFFPFSFFILNIVYWTTFL 426
            :...|..:..|...      :.|....|...||..|...||||||:.||:||..::
 Worm   374 IISERRFMFPPGCSESSKSLSSCTSGWTPERIDSISSVMFPFSFFVFNIIYWFYYI 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HisCl1NP_731632.1 Neur_chan_LBD 67..262 CDD:280998 48/201 (24%)
Neur_chan_memb 270..>350 CDD:280999 37/79 (47%)
acc-2NP_501567.1 Neur_chan_LBD 51..258 CDD:308532 50/213 (23%)
Neur_chan_memb 267..>347 CDD:308533 38/80 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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