DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HisCl1 and glc-4

DIOPT Version :9

Sequence 1:NP_731632.1 Gene:HisCl1 / 41426 FlyBaseID:FBgn0037950 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_495489.2 Gene:glc-4 / 182971 WormBaseID:WBGene00001594 Length:500 Species:Caenorhabditis elegans


Alignment Length:512 Identity:133/512 - (25%)
Similarity:227/512 - (44%) Gaps:128/512 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LIALAIYLHALEQSIQHC-------HCVH--GYRNNTESAELVSHYESSLSLPDILPIPSKTYDK 69
            |:||.:...|.:...:.|       |..:  .:|......:|:..|:::     :.|.....|:.
 Worm    10 LLALLVSSTAKKSKTKSCKRTAFSRHTTNYQAWREQMTVCDLLQDYDAA-----VRPSGRTPYND 69

  Fly    70 NRAPKLLGQPTVVYFHVTVLSLDSINEESMTYVTDIFLAQSWRDPRLRLPEN---MSEQYRILDV 131
            .|.      ..:|...:.:.|:.:::|::|.:|......|.|.|.|||..|:   :|..||  :.
 Worm    70 TRG------AVMVTTSLNIRSISAVSEKNMEFVAQFRFRQEWYDDRLRFIEHQGLLSSDYR--NF 126

  Fly   132 DWLH-----SIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPH 191
            :::|     |:|.||.||:|.|...:|.::..|.:|.:..|..|:|..:|||.|:|:|....||.
 Worm   127 EFIHVARDQSLWIPDTFFQNEKNGWYHMLNQENRFLKIRSDGKLIYDRRLTLHLACSMHLSRYPM 191

  Fly   192 DTQICSMMIESLSHTVEDLVFIWNMTDPLVVNTEIE------LPQLDISNNYTTDCTIEYSTGNF 250
            |.|.|.:...|.::|..|:.:||::  |.:   :|.      ||..:|::.....||.:.:||.:
 Worm   192 DHQNCEIAFASYAYTTADIEYIWDV--PAI---QIHEGANGALPNFEIASFKNASCTSKTNTGTY 251

  Fly   251 TCLAIVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQ 315
            :||.:...|.|...:.|...||||:::|.::|:|:||..::..|||.|.:.:|||:.|.:.....
 Worm   252 SCLKVEIRLNRVFSFFLLQLYIPSSMLVGVAWVSYWIDWKSTAARVPLAIVTLLTMITTSHAINS 316

  Fly   316 SLPPVSYVKAIDVWMSSCSVFVFLSLMEFAVVNNFMGPVATKAMKGYSDE--------------- 365
            :||||||.|:||:|:.:|.||:|.||:|:||||          ..|..||               
 Worm   317 NLPPVSYAKSIDIWVGACVVFIFFSLIEYAVVN----------YVGILDEHRQMKKAACNRSRLS 371

  Fly   366 NISDLDDLKSALQ------HHRESII-----------EPQYD--------------------TFC 393
            |:.:.|:...:||      ..::.:|           |..::                    || 
 Worm   372 NVIENDNFGESLQSLTFSPQEKKRLIRRRPKKNMEMQEGDFEAIEMVDRGPPRSAGLMEEGWTF- 435

  Fly   394 HGHATAIY------------------------IDKFSRFFFPFSFFILNIVYWTTFL 426
            |.....:|                        ||..:|..||.:|.:.|..||:.:|
 Worm   436 HDTTDLVYIGQRKRVELVRWCSVLSSRGRAERIDIIARIIFPLAFILFNFAYWSIYL 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HisCl1NP_731632.1 Neur_chan_LBD 67..262 CDD:280998 60/208 (29%)
Neur_chan_memb 270..>350 CDD:280999 38/79 (48%)
glc-4NP_495489.2 LIC 26..491 CDD:273305 128/493 (26%)
Neur_chan_LBD 50..258 CDD:280998 62/225 (28%)
Neur_chan_memb 271..488 CDD:280999 58/227 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D276914at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18945
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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