DRSC/TRiP Functional Genomics Resources

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Protein Alignment HisCl1 and glc-1

DIOPT Version :10

Sequence 1:NP_731632.1 Gene:HisCl1 / 41426 FlyBaseID:FBgn0037950 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_507090.1 Gene:glc-1 / 180086 WormBaseID:WBGene00001591 Length:461 Species:Caenorhabditis elegans


Alignment Length:424 Identity:142/424 - (33%)
Similarity:224/424 - (52%) Gaps:43/424 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 NNTESAELVSHYESSLSLPDILPIPSKT----------YD-KNRAPKLLGQPTVVYFHVTVLSLD 92
            |.|.:.|.::...|.:.:|...|..|.:          || :.|.|...|.|.||..::.:.::.
 Worm    37 NGTTTLESLARLTSPIHIPIEQPQTSDSKILAHLFTSGYDFRVRPPTDNGGPVVVSVNMLLRTIS 101

  Fly    93 SINEESMTYVTDIFLAQSWRDPRLR--LPENMSEQYRILDVDWLHSIWRPDCFFKNAKKVTFHEM 155
            .|:..:|.|...:.|.:||.|.||.  :..:....:.||.|.  |.||.||.||.|.|:...|.:
 Worm   102 KIDVVNMEYSAQLTLRESWIDKRLSYGVKGDGQPDFVILTVG--HQIWMPDTFFPNEKQAYKHTI 164

  Fly   156 SIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTVEDLVFIWNMTDP- 219
            ..||..:.:::|.|:||..:::|||||.|..:.||.|.|.||:.:.|.::|.:|:.::|....| 
 Worm   165 DKPNVLIRIHNDGTVLYSVRISLVLSCPMYLQYYPMDVQQCSIDLASYAYTTKDIEYLWKEHSPL 229

  Fly   220 -LVVNTEIELPQLDISNNYTTDCTIEYSTGNFTCLAIVFNLRRRLGYHLFHTYIPSALIVVMSWI 283
             |.|.....||...::|..||.||...:||.::||.....|:|...::|...||||.::|::||:
 Worm   230 QLKVGLSSSLPSFQLTNTSTTYCTSVTNTGIYSCLRTTIQLKREFSFYLLQLYIPSCMLVIVSWV 294

  Fly   284 SFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDVWMSSCSVFVFLSLMEFAVVN 348
            |||....|||||||||||:|||:..|:......||||||:||||||:.:|..|:|.:|:|||:||
 Worm   295 SFWFDRTAIPARVTLGVTTLLTMTAQSAGINSQLPPVSYIKAIDVWIGACMTFIFCALLEFALVN 359

  Fly   349 NFMGPVATK---AMKGYSDENISDL-------DDLKSALQHHRESI-----IEPQYDTFCHGHAT 398
            :    :|.|   ..|..::...:::       :|:.:.:.:..|.:     ...|.::|.:...|
 Worm   360 H----IANKQGVERKARTEREKAEIPLLQNLHNDVPTKVFNQEEKVRTVPLNRRQMNSFLNLLET 420

  Fly   399 -------AIYIDKFSRFFFPFSFFILNIVYWTTF 425
                   :..:|..||..||..||:.||:||:.|
 Worm   421 KTEWNDISKRVDLISRALFPVLFFVFNILYWSRF 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HisCl1NP_731632.1 LGIC_ECD_HisCl 78..262 CDD:349793 62/187 (33%)
Cys-loop 182..196 CDD:349793 6/13 (46%)
LGIC_TM_anion 265..>351 CDD:349851 47/85 (55%)
TM1 helix 265..288 CDD:349851 11/22 (50%)
TM2 helix 292..316 CDD:349851 14/23 (61%)
TM3 helix 324..350 CDD:349851 15/25 (60%)
glc-1NP_507090.1 LIC 65..452 CDD:455710 133/392 (34%)

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